Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.56■□□□□ 0.72
HMGCS1Q01581 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
HMGCS1Q01581 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGCS1Q01581 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCS1Q01581 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.56■□□□□ 0.72
HMGCS1Q01581 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGCS1Q01581 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.56■□□□□ 0.72
HMGCS1Q01581 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGCS1Q01581 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCS1Q01581 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HMGCS1Q01581 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCS1Q01581 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCS1Q01581 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCS1Q01581 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HMGCS1Q01581 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS1Q01581 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
HMGCS1Q01581 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCS1Q01581 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCS1Q01581 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCS1Q01581 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.54■□□□□ 0.72
HMGCS1Q01581 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.54■□□□□ 0.72
HMGCS1Q01581 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS1Q01581 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS1Q01581 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HMGCS1Q01581 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS1Q01581 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HMGCS1Q01581 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS1Q01581 KRT8P36-201ENST00000489121 1440 ntBASIC19.53■□□□□ 0.72
HMGCS1Q01581 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS1Q01581 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCS1Q01581 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.53■□□□□ 0.72
HMGCS1Q01581 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.53■□□□□ 0.72
HMGCS1Q01581 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCS1Q01581 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCS1Q01581 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HMGCS1Q01581 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS1Q01581 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCS1Q01581 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HMGCS1Q01581 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS1Q01581 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS1Q01581 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGCS1Q01581 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS1Q01581 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS1Q01581 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS1Q01581 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGCS1Q01581 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
HMGCS1Q01581 CDV3P1-201ENST00000471403 739 ntBASIC19.52■□□□□ 0.72
HMGCS1Q01581 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGCS1Q01581 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.52■□□□□ 0.72
HMGCS1Q01581 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.52■□□□□ 0.72
HMGCS1Q01581 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HMGCS1Q01581 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HMGCS1Q01581 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS1Q01581 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.52■□□□□ 0.71
HMGCS1Q01581 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCS1Q01581 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCS1Q01581 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCS1Q01581 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCS1Q01581 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCS1Q01581 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms