Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.17■□□□□ 0.5
H3F3AP84243 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.17■□□□□ 0.5
H3F3AP84243 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
H3F3AP84243 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.17■□□□□ 0.5
H3F3AP84243 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.17■□□□□ 0.5
H3F3AP84243 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.17■□□□□ 0.5
H3F3AP84243 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.17■□□□□ 0.5
H3F3AP84243 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.17■□□□□ 0.5
H3F3AP84243 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.17■□□□□ 0.5
H3F3AP84243 AC104771.1-201ENST00000603335 964 ntBASIC18.17■□□□□ 0.5
H3F3AP84243 AL109923.1-201ENST00000618799 583 ntBASIC18.17■□□□□ 0.5
H3F3AP84243 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.17■□□□□ 0.5
H3F3AP84243 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.17■□□□□ 0.5
H3F3AP84243 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.17■□□□□ 0.5
H3F3AP84243 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 AP005212.1-201ENST00000581547 1997 ntBASIC18.17■□□□□ 0.5
H3F3AP84243 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3AP84243 AC073314.1-201ENST00000568729 2216 ntBASIC18.17■□□□□ 0.5
H3F3AP84243 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
H3F3AP84243 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
H3F3AP84243 SLC29A4P1-201ENST00000398760 971 ntBASIC18.16■□□□□ 0.5
H3F3AP84243 BX276092.2-201ENST00000417668 665 ntBASIC18.16■□□□□ 0.5
H3F3AP84243 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.16■□□□□ 0.5
H3F3AP84243 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.16■□□□□ 0.5
H3F3AP84243 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.16■□□□□ 0.5
H3F3AP84243 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.16■□□□□ 0.5
H3F3AP84243 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3AP84243 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3AP84243 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3AP84243 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3AP84243 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3AP84243 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3AP84243 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3AP84243 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
H3F3AP84243 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.15■□□□□ 0.5
H3F3AP84243 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
H3F3AP84243 AC092118.2-201ENST00000613495 667 ntBASIC18.15■□□□□ 0.5
H3F3AP84243 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.15■□□□□ 0.5
H3F3AP84243 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3AP84243 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3AP84243 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
H3F3AP84243 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
H3F3AP84243 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3AP84243 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
H3F3AP84243 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.15■□□□□ 0.5
H3F3AP84243 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
H3F3AP84243 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3AP84243 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.14■□□□□ 0.5
H3F3AP84243 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
H3F3AP84243 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3AP84243 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.14■□□□□ 0.49
H3F3AP84243 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
H3F3AP84243 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3AP84243 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
H3F3AP84243 ID1-201ENST00000376105 1233 ntBASIC18.14■□□□□ 0.49
H3F3AP84243 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.14■□□□□ 0.49
H3F3AP84243 LSM12P1-201ENST00000411836 588 ntBASIC18.14■□□□□ 0.49
H3F3AP84243 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.14■□□□□ 0.49
H3F3AP84243 AC142086.2-201ENST00000569753 217 ntBASIC18.14■□□□□ 0.49
H3F3AP84243 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3AP84243 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
H3F3AP84243 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3AP84243 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3AP84243 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3AP84243 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
H3F3AP84243 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.14■□□□□ 0.49
H3F3AP84243 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3AP84243 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.14■□□□□ 0.49
H3F3AP84243 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.14■□□□□ 0.49
H3F3AP84243 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
H3F3AP84243 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3AP84243 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.14■□□□□ 0.49
H3F3AP84243 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3AP84243 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms