Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 RAD54L2-205ENST00000487093 4782 ntTSL 59.1□□□□□ -0.956e-6■■□□□ 14.5
LSM11P83369 WDR27-205ENST00000467418 947 ntTSL 59.07□□□□□ -0.966e-6■■□□□ 14.5
LSM11P83369 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.016e-6■■□□□ 14.5
LSM11P83369 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.028e-8■■□□□ 14.5
LSM11P83369 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.056e-6■■□□□ 14.5
LSM11P83369 PARPBP-205ENST00000412715 2133 ntTSL 1 (best)7.33□□□□□ -1.246e-6■■□□□ 14.5
LSM11P83369 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.296e-6■■□□□ 14.5
LSM11P83369 RAD54L2-202ENST00000432863 3926 ntTSL 26.95□□□□□ -1.36e-6■■□□□ 14.5
LSM11P83369 CUX1-219ENST00000606749 601 ntTSL 46.63□□□□□ -1.356e-6■■□□□ 14.5
LSM11P83369 PARPBP-206ENST00000417507 2212 ntTSL 1 (best)6.57□□□□□ -1.366e-6■■□□□ 14.5
LSM11P83369 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC5.92□□□□□ -1.466e-6■■□□□ 14.5
LSM11P83369 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.496e-6■■□□□ 14.5
LSM11P83369 CRY1-205ENST00000552790 3834 ntTSL 25.57□□□□□ -1.526e-6■■□□□ 14.5
LSM11P83369 PARPBP-207ENST00000457614 2319 ntTSL 1 (best)5.39□□□□□ -1.556e-6■■□□□ 14.5
LSM11P83369 SHTN1-206ENST00000497044 3647 ntTSL 24.45□□□□□ -1.76e-6■■□□□ 14.5
LSM11P83369 MIR210HG-204ENST00000534540 367 ntTSL 212.45□□□□□ -0.422e-8■■□□□ 14.5
LSM11P83369 MIR210-201ENST00000362168 110 ntBASIC8.83□□□□□ -14e-11■■□□□ 14.5
LSM11P83369 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.21■□□□□ 0.351e-8■■□□□ 14.5
LSM11P83369 LAMA5-203ENST00000370691 3160 ntTSL 1 (best)12.56□□□□□ -0.41e-9■■□□□ 14.4
LSM11P83369 ADAMTSL4-206ENST00000489159 1803 ntTSL 216.45■□□□□ 0.222e-6■■□□□ 14.4
LSM11P83369 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.32e-6■■□□□ 14.4
LSM11P83369 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.342e-6■■□□□ 14.4
LSM11P83369 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.512e-6■■□□□ 14.4
LSM11P83369 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.38■□□□□ 0.212e-6■■□□□ 14.4
LSM11P83369 LMBR1L-202ENST00000417750 2334 ntTSL 215.18■□□□□ 0.022e-6■■□□□ 14.4
LSM11P83369 LMBR1L-207ENST00000547698 905 ntTSL 514.09□□□□□ -0.152e-6■■□□□ 14.4
LSM11P83369 LMBR1L-216ENST00000550867 2800 ntTSL 1 (best)13.12□□□□□ -0.312e-6■■□□□ 14.4
LSM11P83369 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.442e-6■■□□□ 14.4
LSM11P83369 LMBR1L-208ENST00000547813 1024 ntTSL 511.96□□□□□ -0.492e-6■■□□□ 14.4
LSM11P83369 LMBR1L-227ENST00000552577 2083 ntTSL 211.18□□□□□ -0.622e-6■■□□□ 14.4
LSM11P83369 LMBR1L-229ENST00000553040 768 ntTSL 59.39□□□□□ -0.912e-6■■□□□ 14.4
LSM11P83369 SRRM2-216ENST00000573583 543 ntTSL 49.53□□□□□ -0.881e-14■■□□□ 14.4
LSM11P83369 LRCH4-205ENST00000485554 774 ntTSL 315.55■□□□□ 0.083e-10■■□□□ 14.4
LSM11P83369 DCXR-213ENST00000580320 915 ntTSL 219.14■□□□□ 0.656e-9■■□□□ 14.4
LSM11P83369 DCXR-206ENST00000578273 877 ntTSL 519.11■□□□□ 0.656e-9■■□□□ 14.4
LSM11P83369 DCXR-210ENST00000579334 1251 ntTSL 518.78■□□□□ 0.66e-9■■□□□ 14.4
LSM11P83369 DCXR-214ENST00000580750 1076 ntTSL 518.53■□□□□ 0.566e-9■■□□□ 14.4
LSM11P83369 DCXR-207ENST00000578885 968 ntTSL 518.23■□□□□ 0.516e-9■■□□□ 14.4
LSM11P83369 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.486e-9■■□□□ 14.4
LSM11P83369 DCXR-212ENST00000579842 715 ntTSL 317.72■□□□□ 0.436e-9■■□□□ 14.4
LSM11P83369 DCXR-218ENST00000582900 676 ntTSL 317.72■□□□□ 0.436e-9■■□□□ 14.4
LSM11P83369 DCXR-215ENST00000581584 766 ntTSL 316.96■□□□□ 0.316e-9■■□□□ 14.4
LSM11P83369 DCXR-211ENST00000579821 452 ntTSL 311.69□□□□□ -0.546e-9■■□□□ 14.4
LSM11P83369 DCXR-216ENST00000582074 631 ntTSL 310.02□□□□□ -0.816e-9■■□□□ 14.4
LSM11P83369 DCXR-203ENST00000577532 573 ntTSL 37.14□□□□□ -1.276e-9■■□□□ 14.4
LSM11P83369 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.252e-8■■□□□ 14.4
LSM11P83369 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.132e-8■■□□□ 14.4
LSM11P83369 EPS8L2-227ENST00000534449 491 ntTSL 317.47■□□□□ 0.392e-10■■□□□ 14.4
LSM11P83369 TCIRG1-211ENST00000530449 525 ntTSL 1 (best)18.76■□□□□ 0.591e-7■■□□□ 14.4
LSM11P83369 LTBP3-207ENST00000526927 2750 ntTSL 216.38■□□□□ 0.212e-7■■□□□ 14.4
LSM11P83369 PHKA2-205ENST00000473597 514 ntTSL 210.04□□□□□ -0.84e-8■■□□□ 14.4
LSM11P83369 TAF15-210ENST00000604694 891 ntTSL 514.81□□□□□ -0.041e-6■■□□□ 14.3
LSM11P83369 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.058e-10■■□□□ 14.3
LSM11P83369 AL137127.1-201ENST00000606379 3402 ntBASIC9.97□□□□□ -0.813e-16■■□□□ 14.3
LSM11P83369 UBR4-208ENST00000459947 3873 ntTSL 29.32□□□□□ -0.923e-16■■□□□ 14.3
LSM11P83369 UBR4-214ENST00000486515 536 ntTSL 36.2□□□□□ -1.423e-16■■□□□ 14.3
LSM11P83369 LARP1-210ENST00000519931 569 ntTSL 46.82□□□□□ -1.325e-7■■□□□ 14.3
LSM11P83369 AC091959.3-201ENST00000506502 3311 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.575e-7■■□□□ 14.3
LSM11P83369 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.09■□□□□ 0.496e-10■■□□□ 14.3
LSM11P83369 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.256e-10■■□□□ 14.3
LSM11P83369 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.056e-10■■□□□ 14.3
LSM11P83369 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.496e-7■■□□□ 14.3
LSM11P83369 DENND4B-208ENST00000480340 2530 ntTSL 213.02□□□□□ -0.326e-7■■□□□ 14.3
LSM11P83369 DENND4B-211ENST00000492898 951 ntTSL 511.24□□□□□ -0.616e-7■■□□□ 14.3
LSM11P83369 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.325e-7■■□□□ 14.3
LSM11P83369 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC11.7□□□□□ -0.545e-7■■□□□ 14.3
LSM11P83369 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.855e-7■■□□□ 14.3
LSM11P83369 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC9.13□□□□□ -0.955e-7■■□□□ 14.3
LSM11P83369 MCM3-203ENST00000421471 1030 ntTSL 58.6□□□□□ -1.035e-7■■□□□ 14.3
LSM11P83369 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.52□□□□□ -1.055e-7■■□□□ 14.3
LSM11P83369 ING3-203ENST00000427726 1718 ntTSL 1 (best)7.2□□□□□ -1.266e-13■■□□□ 14.3
LSM11P83369 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.76e-13■■□□□ 14.3
LSM11P83369 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.941e-6■■□□□ 14.3
LSM11P83369 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.91e-6■■□□□ 14.3
LSM11P83369 PPT2-EGFL8-203ENST00000428388 2878 ntAPPRIS P5 TSL 215.07■□□□□ 01e-6■■□□□ 14.3
LSM11P83369 EGFL8-222ENST00000466239 2441 ntTSL 214.37□□□□□ -0.111e-6■■□□□ 14.3
LSM11P83369 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.391e-6■■□□□ 14.3
LSM11P83369 ADARB1-207ENST00000460734 2523 ntTSL 1 (best)23.45■■□□□ 1.345e-7■■□□□ 14.2
LSM11P83369 ADARB1-203ENST00000389861 5031 ntTSL 1 (best)19.09■□□□□ 0.655e-7■■□□□ 14.2
LSM11P83369 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.09■□□□□ 0.655e-7■■□□□ 14.2
LSM11P83369 ADARB1-212ENST00000496664 5033 ntTSL 1 (best)19.09■□□□□ 0.655e-7■■□□□ 14.2
LSM11P83369 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.595e-7■■□□□ 14.2
LSM11P83369 ADARB1-211ENST00000492414 4913 ntTSL 1 (best)18.35■□□□□ 0.535e-7■■□□□ 14.2
LSM11P83369 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.25e-7■■□□□ 14.2
LSM11P83369 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.02■□□□□ 0.155e-7■■□□□ 14.2
LSM11P83369 FCGR2C-203ENST00000467903 1101 ntTSL 312.54□□□□□ -0.45e-7■■□□□ 14.2
LSM11P83369 SET-205ENST00000409104 962 ntTSL 5 BASIC11.98□□□□□ -0.495e-7■■□□□ 14.2
LSM11P83369 CHID1-214ENST00000528534 321 ntTSL 311.66□□□□□ -0.545e-7■■□□□ 14.2
LSM11P83369 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.595e-7■■□□□ 14.2
LSM11P83369 SET-202ENST00000372686 1029 ntTSL 210.4□□□□□ -0.745e-7■■□□□ 14.2
LSM11P83369 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC9.61□□□□□ -0.875e-7■■□□□ 14.2
LSM11P83369 SET-203ENST00000372688 801 ntTSL 2 BASIC8.8□□□□□ -15e-7■■□□□ 14.2
LSM11P83369 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -15e-7■■□□□ 14.2
LSM11P83369 RNU6-31P-201ENST00000384388 108 ntBASIC8.35□□□□□ -1.075e-7■■□□□ 14.2
LSM11P83369 RHBG-203ENST00000494874 324 ntTSL 39.42□□□□□ -0.97e-10■■□□□ 14.2
LSM11P83369 VIL1-202ENST00000392114 1968 ntTSL 2 BASIC11.02□□□□□ -0.655e-7■■□□□ 14.2
LSM11P83369 SRRM2-217ENST00000573692 459 ntTSL 315.62■□□□□ 0.091e-32■■□□□ 14.2
LSM11P83369 SRRM2-202ENST00000570539 431 ntTSL 28.99□□□□□ -0.971e-32■■□□□ 14.2
LSM11P83369 PCYT2-207ENST00000571581 999 ntTSL 522.34■■□□□ 1.171e-7■■□□□ 14.2
LSM11P83369 PCYT2-213ENST00000573401 1028 ntTSL 521.51■■□□□ 1.031e-7■■□□□ 14.2
Retrieved 100 of 11,495 protein–RNA pairs in 74.8 ms