Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.95■□□□□ 0.62
RPS3AP61247 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.95■□□□□ 0.62
RPS3AP61247 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.95■□□□□ 0.62
RPS3AP61247 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS3AP61247 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.95■□□□□ 0.62
RPS3AP61247 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS3AP61247 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPS3AP61247 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPS3AP61247 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RPS3AP61247 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS3AP61247 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS3AP61247 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
RPS3AP61247 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS3AP61247 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS3AP61247 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS3AP61247 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS3AP61247 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS3AP61247 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS3AP61247 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS3AP61247 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS3AP61247 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS3AP61247 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS3AP61247 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RPS3AP61247 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.94■□□□□ 0.62
RPS3AP61247 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS3AP61247 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS3AP61247 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS3AP61247 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS3AP61247 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS3AP61247 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.94■□□□□ 0.62
RPS3AP61247 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS3AP61247 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS3AP61247 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS3AP61247 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS3AP61247 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS3AP61247 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS3AP61247 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RPS3AP61247 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPS3AP61247 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPS3AP61247 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS3AP61247 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS3AP61247 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS3AP61247 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RPS3AP61247 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.93■□□□□ 0.62
RPS3AP61247 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS3AP61247 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS3AP61247 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS3AP61247 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS3AP61247 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.93■□□□□ 0.62
RPS3AP61247 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS3AP61247 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.93■□□□□ 0.62
RPS3AP61247 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS3AP61247 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS3AP61247 UBE2DNL-204ENST00000602536 740 ntBASIC18.93■□□□□ 0.62
RPS3AP61247 MYCNOS-205ENST00000641950 531 ntBASIC18.93■□□□□ 0.62
RPS3AP61247 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS3AP61247 AL049796.1-201ENST00000565336 1766 ntBASIC18.93■□□□□ 0.62
RPS3AP61247 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS3AP61247 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS3AP61247 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS3AP61247 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS3AP61247 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS3AP61247 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS3AP61247 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS3AP61247 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS3AP61247 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
RPS3AP61247 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS3AP61247 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS3AP61247 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.92■□□□□ 0.62
RPS3AP61247 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS3AP61247 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS3AP61247 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPS3AP61247 AC080038.1-201ENST00000611274 1154 ntBASIC18.92■□□□□ 0.62
RPS3AP61247 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS3AP61247 AC011767.1-201ENST00000617410 1153 ntBASIC18.92■□□□□ 0.62
RPS3AP61247 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS3AP61247 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RPS3AP61247 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPS3AP61247 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.92■□□□□ 0.62
RPS3AP61247 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS3AP61247 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS3AP61247 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS3AP61247 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.92■□□□□ 0.62
RPS3AP61247 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS3AP61247 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPS3AP61247 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.91■□□□□ 0.62
RPS3AP61247 SLC7A5P1-201ENST00000568957 537 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms