Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM11AP58511 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM11AP58511 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.69■□□□□ 0.58
SMIM11AP58511 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM11AP58511 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM11AP58511 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.69■□□□□ 0.58
SMIM11AP58511 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM11AP58511 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.69■□□□□ 0.58
SMIM11AP58511 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM11AP58511 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.69■□□□□ 0.58
SMIM11AP58511 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM11AP58511 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.69■□□□□ 0.58
SMIM11AP58511 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.69■□□□□ 0.58
SMIM11AP58511 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SMIM11AP58511 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.69■□□□□ 0.58
SMIM11AP58511 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.69■□□□□ 0.58
SMIM11AP58511 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SMIM11AP58511 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SMIM11AP58511 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM11AP58511 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM11AP58511 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.68■□□□□ 0.58
SMIM11AP58511 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.68■□□□□ 0.58
SMIM11AP58511 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.68■□□□□ 0.58
SMIM11AP58511 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.68■□□□□ 0.58
SMIM11AP58511 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM11AP58511 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.68■□□□□ 0.58
SMIM11AP58511 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.68■□□□□ 0.58
SMIM11AP58511 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM11AP58511 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM11AP58511 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM11AP58511 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM11AP58511 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM11AP58511 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SMIM11AP58511 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SMIM11AP58511 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM11AP58511 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM11AP58511 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SMIM11AP58511 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM11AP58511 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SMIM11AP58511 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM11AP58511 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.67■□□□□ 0.58
SMIM11AP58511 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM11AP58511 DUX4L2-201ENST00000561772 1275 ntBASIC18.67■□□□□ 0.58
SMIM11AP58511 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM11AP58511 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SMIM11AP58511 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
SMIM11AP58511 AC110285.6-201ENST00000617652 491 ntBASIC18.67■□□□□ 0.58
SMIM11AP58511 DUX4L6-201ENST00000626483 1275 ntBASIC18.67■□□□□ 0.58
SMIM11AP58511 DUX4L1-201ENST00000627662 1275 ntBASIC18.67■□□□□ 0.58
SMIM11AP58511 DUX4L8-201ENST00000629013 1275 ntBASIC18.67■□□□□ 0.58
SMIM11AP58511 DUX4L3-201ENST00000630187 1275 ntBASIC18.67■□□□□ 0.58
SMIM11AP58511 DUX4L7-201ENST00000630678 1275 ntBASIC18.67■□□□□ 0.58
SMIM11AP58511 DUX4L5-201ENST00000630834 1275 ntBASIC18.67■□□□□ 0.58
SMIM11AP58511 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
SMIM11AP58511 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM11AP58511 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM11AP58511 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM11AP58511 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SMIM11AP58511 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMIM11AP58511 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.66■□□□□ 0.58
SMIM11AP58511 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.66■□□□□ 0.58
SMIM11AP58511 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.66■□□□□ 0.58
SMIM11AP58511 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.66■□□□□ 0.58
SMIM11AP58511 AL031432.3-201ENST00000607698 485 ntBASIC18.66■□□□□ 0.58
SMIM11AP58511 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.66■□□□□ 0.58
SMIM11AP58511 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMIM11AP58511 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMIM11AP58511 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMIM11AP58511 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.66■□□□□ 0.58
SMIM11AP58511 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM11AP58511 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms