Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB38P57729 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RAB38P57729 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
RAB38P57729 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB38P57729 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB38P57729 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB38P57729 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB38P57729 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB38P57729 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB38P57729 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB38P57729 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB38P57729 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB38P57729 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB38P57729 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB38P57729 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB38P57729 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RAB38P57729 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB38P57729 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB38P57729 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB38P57729 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB38P57729 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB38P57729 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.11■□□□□ 0.65
RAB38P57729 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB38P57729 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB38P57729 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB38P57729 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.11■□□□□ 0.65
RAB38P57729 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB38P57729 C2orf69P4-201ENST00000565394 541 ntBASIC19.11■□□□□ 0.65
RAB38P57729 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.11■□□□□ 0.65
RAB38P57729 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB38P57729 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB38P57729 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB38P57729 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB38P57729 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB38P57729 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RAB38P57729 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB38P57729 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.1■□□□□ 0.65
RAB38P57729 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB38P57729 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
RAB38P57729 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB38P57729 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB38P57729 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB38P57729 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB38P57729 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.1■□□□□ 0.65
RAB38P57729 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.1■□□□□ 0.65
RAB38P57729 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB38P57729 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB38P57729 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.1■□□□□ 0.65
RAB38P57729 AC097658.1-201ENST00000475555 843 ntBASIC19.1■□□□□ 0.65
RAB38P57729 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.1■□□□□ 0.65
RAB38P57729 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.1■□□□□ 0.65
RAB38P57729 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB38P57729 MYC-209ENST00000641252 345 ntBASIC19.1■□□□□ 0.65
RAB38P57729 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.1■□□□□ 0.65
RAB38P57729 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
RAB38P57729 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.1■□□□□ 0.65
RAB38P57729 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB38P57729 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB38P57729 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB38P57729 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.09■□□□□ 0.65
RAB38P57729 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB38P57729 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RAB38P57729 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB38P57729 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.09■□□□□ 0.65
RAB38P57729 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RAB38P57729 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB38P57729 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.09■□□□□ 0.65
RAB38P57729 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.08■□□□□ 0.65
RAB38P57729 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RAB38P57729 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB38P57729 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB38P57729 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB38P57729 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB38P57729 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RAB38P57729 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.08■□□□□ 0.64
RAB38P57729 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RAB38P57729 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.08■□□□□ 0.64
RAB38P57729 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.08■□□□□ 0.64
RAB38P57729 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 FEM1AP1-201ENST00000431297 1995 ntBASIC19.08■□□□□ 0.64
RAB38P57729 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB38P57729 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms