Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN12P56749 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN12P56749 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN12P56749 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CLDN12P56749 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN12P56749 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN12P56749 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLDN12P56749 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN12P56749 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLDN12P56749 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLDN12P56749 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN12P56749 EEF1DP3-203ENST00000566025 782 ntBASIC17.62■□□□□ 0.41
CLDN12P56749 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.62■□□□□ 0.41
CLDN12P56749 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN12P56749 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLDN12P56749 AP000974.1-201ENST00000623909 2387 ntBASIC17.62■□□□□ 0.41
CLDN12P56749 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN12P56749 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CLDN12P56749 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CLDN12P56749 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLDN12P56749 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN12P56749 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.61■□□□□ 0.41
CLDN12P56749 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN12P56749 AC053503.5-201ENST00000601508 636 ntBASIC17.61■□□□□ 0.41
CLDN12P56749 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLDN12P56749 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN12P56749 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.61■□□□□ 0.41
CLDN12P56749 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLDN12P56749 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLDN12P56749 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN12P56749 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN12P56749 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CLDN12P56749 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN12P56749 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN12P56749 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN12P56749 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.6■□□□□ 0.41
CLDN12P56749 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.6■□□□□ 0.41
CLDN12P56749 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN12P56749 AC120498.9-201ENST00000339021 3867 ntBASIC17.6■□□□□ 0.41
CLDN12P56749 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLDN12P56749 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN12P56749 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN12P56749 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN12P56749 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN12P56749 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN12P56749 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN12P56749 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CLDN12P56749 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CLDN12P56749 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLDN12P56749 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLDN12P56749 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN12P56749 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CLDN12P56749 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.59■□□□□ 0.41
CLDN12P56749 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.59■□□□□ 0.41
CLDN12P56749 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN12P56749 UNC93B3-201ENST00000308076 687 ntBASIC17.59■□□□□ 0.41
CLDN12P56749 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLDN12P56749 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN12P56749 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms