Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
CDH6P55285 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH6P55285 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH6P55285 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH6P55285 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH6P55285 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH6P55285 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH6P55285 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH6P55285 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CDH6P55285 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDH6P55285 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH6P55285 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH6P55285 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.13■□□□□ 0.97
CDH6P55285 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH6P55285 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDH6P55285 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH6P55285 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CDH6P55285 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH6P55285 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH6P55285 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH6P55285 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH6P55285 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH6P55285 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDH6P55285 AL162377.1-201ENST00000618844 1793 ntBASIC21.13■□□□□ 0.97
CDH6P55285 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH6P55285 SLC25A24-204ENST00000569674 2357 ntBASIC21.12■□□□□ 0.97
CDH6P55285 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
CDH6P55285 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CDH6P55285 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH6P55285 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDH6P55285 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH6P55285 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
CDH6P55285 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDH6P55285 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDH6P55285 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH6P55285 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.12■□□□□ 0.97
CDH6P55285 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH6P55285 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH6P55285 AC068338.2-201ENST00000563278 1430 ntBASIC21.12■□□□□ 0.97
CDH6P55285 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CDH6P55285 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CDH6P55285 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH6P55285 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH6P55285 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH6P55285 AC092437.1-201ENST00000624794 1048 ntBASIC21.11■□□□□ 0.97
CDH6P55285 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.11■□□□□ 0.97
CDH6P55285 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH6P55285 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH6P55285 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH6P55285 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH6P55285 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH6P55285 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH6P55285 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH6P55285 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH6P55285 CYP21A1P-202ENST00000354927 1481 ntBASIC21.1■□□□□ 0.97
CDH6P55285 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH6P55285 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.1■□□□□ 0.97
CDH6P55285 AL137784.2-201ENST00000607332 1000 ntBASIC21.1■□□□□ 0.97
CDH6P55285 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH6P55285 IKBKGP1-201ENST00000612193 1073 ntBASIC21.1■□□□□ 0.97
CDH6P55285 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CDH6P55285 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH6P55285 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH6P55285 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH6P55285 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
CDH6P55285 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH6P55285 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH6P55285 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDH6P55285 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH6P55285 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH6P55285 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH6P55285 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CDH6P55285 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDH6P55285 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.09■□□□□ 0.97
CDH6P55285 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH6P55285 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDH6P55285 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms