Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.17■□□□□ 0.66
NR1H2P55055 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.17■□□□□ 0.66
NR1H2P55055 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.17■□□□□ 0.66
NR1H2P55055 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NR1H2P55055 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NR1H2P55055 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.17■□□□□ 0.66
NR1H2P55055 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NR1H2P55055 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NR1H2P55055 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NR1H2P55055 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.16■□□□□ 0.66
NR1H2P55055 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
NR1H2P55055 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H2P55055 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H2P55055 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.16■□□□□ 0.66
NR1H2P55055 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.16■□□□□ 0.66
NR1H2P55055 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H2P55055 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H2P55055 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H2P55055 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.16■□□□□ 0.66
NR1H2P55055 AC010525.1-201ENST00000585559 441 ntBASIC19.16■□□□□ 0.66
NR1H2P55055 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.16■□□□□ 0.66
NR1H2P55055 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H2P55055 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NR1H2P55055 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
NR1H2P55055 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
NR1H2P55055 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.16■□□□□ 0.66
NR1H2P55055 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H2P55055 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NR1H2P55055 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.16■□□□□ 0.66
NR1H2P55055 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.16■□□□□ 0.66
NR1H2P55055 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NR1H2P55055 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.15■□□□□ 0.66
NR1H2P55055 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NR1H2P55055 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.15■□□□□ 0.66
NR1H2P55055 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NR1H2P55055 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NR1H2P55055 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NR1H2P55055 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NR1H2P55055 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NR1H2P55055 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NR1H2P55055 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
NR1H2P55055 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 AC007225.1-201ENST00000566331 1836 ntBASIC19.14■□□□□ 0.65
NR1H2P55055 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NR1H2P55055 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.14■□□□□ 0.65
NR1H2P55055 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NR1H2P55055 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.14■□□□□ 0.65
NR1H2P55055 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.14■□□□□ 0.65
NR1H2P55055 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
NR1H2P55055 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.14■□□□□ 0.65
NR1H2P55055 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 AC005082.1-201ENST00000413042 2259 ntBASIC19.14■□□□□ 0.65
NR1H2P55055 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.14■□□□□ 0.65
NR1H2P55055 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.14■□□□□ 0.65
NR1H2P55055 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NR1H2P55055 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR1H2P55055 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
NR1H2P55055 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NR1H2P55055 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NR1H2P55055 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NR1H2P55055 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H2P55055 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NR1H2P55055 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms