Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AC116050.2-201ENST00000612102 1779 ntBASIC17.57■□□□□ 0.4
ATP1B3P54709 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1B3P54709 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ATP1B3P54709 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1B3P54709 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1B3P54709 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1B3P54709 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ATP1B3P54709 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP1B3P54709 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ATP1B3P54709 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ATP1B3P54709 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ATP1B3P54709 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ATP1B3P54709 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP1B3P54709 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ATP1B3P54709 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ATP1B3P54709 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.56■□□□□ 0.4
ATP1B3P54709 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.56■□□□□ 0.4
ATP1B3P54709 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.56■□□□□ 0.4
ATP1B3P54709 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP1B3P54709 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP1B3P54709 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP1B3P54709 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP1B3P54709 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP1B3P54709 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP1B3P54709 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP1B3P54709 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ATP1B3P54709 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1B3P54709 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.55■□□□□ 0.4
ATP1B3P54709 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATP1B3P54709 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.55■□□□□ 0.4
ATP1B3P54709 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP1B3P54709 KRT18P14-201ENST00000534205 1250 ntBASIC17.55■□□□□ 0.4
ATP1B3P54709 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.55■□□□□ 0.4
ATP1B3P54709 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP1B3P54709 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP1B3P54709 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.55■□□□□ 0.4
ATP1B3P54709 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ATP1B3P54709 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP1B3P54709 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATP1B3P54709 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP1B3P54709 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP1B3P54709 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP1B3P54709 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP1B3P54709 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP1B3P54709 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP1B3P54709 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ATP1B3P54709 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP1B3P54709 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP1B3P54709 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP1B3P54709 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.54■□□□□ 0.4
ATP1B3P54709 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP1B3P54709 AC092720.2-201ENST00000602388 1665 ntBASIC17.54■□□□□ 0.4
ATP1B3P54709 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP1B3P54709 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATP1B3P54709 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP1B3P54709 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP1B3P54709 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ATP1B3P54709 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP1B3P54709 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ATP1B3P54709 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP1B3P54709 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP1B3P54709 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP1B3P54709 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP1B3P54709 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP1B3P54709 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
ATP1B3P54709 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP1B3P54709 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATP1B3P54709 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP1B3P54709 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ATP1B3P54709 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP1B3P54709 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP1B3P54709 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP1B3P54709 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP1B3P54709 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms