Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PMS2P54278 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.92■□□□□ 0.94
PMS2P54278 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.91■□□□□ 0.94
PMS2P54278 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PMS2P54278 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 TSPY26P-201ENST00000476365 1326 ntBASIC20.91■□□□□ 0.94
PMS2P54278 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.91■□□□□ 0.94
PMS2P54278 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.91■□□□□ 0.94
PMS2P54278 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.91■□□□□ 0.94
PMS2P54278 AL158211.5-201ENST00000623583 2518 ntBASIC20.91■□□□□ 0.94
PMS2P54278 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PMS2P54278 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 AC098818.2-201ENST00000564925 2320 ntBASIC20.9■□□□□ 0.94
PMS2P54278 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 AC061975.6-201ENST00000579045 1553 ntBASIC20.9■□□□□ 0.94
PMS2P54278 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.9■□□□□ 0.94
PMS2P54278 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.9■□□□□ 0.94
PMS2P54278 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.9■□□□□ 0.94
PMS2P54278 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PMS2P54278 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.9■□□□□ 0.94
PMS2P54278 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.9■□□□□ 0.94
PMS2P54278 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PMS2P54278 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PMS2P54278 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PMS2P54278 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.89■□□□□ 0.93
PMS2P54278 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.89■□□□□ 0.93
PMS2P54278 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PMS2P54278 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.89■□□□□ 0.93
PMS2P54278 AC022517.1-201ENST00000592429 346 ntBASIC20.89■□□□□ 0.93
PMS2P54278 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.89■□□□□ 0.93
PMS2P54278 AL358852.1-201ENST00000623174 1268 ntBASIC20.89■□□□□ 0.93
PMS2P54278 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.89■□□□□ 0.93
PMS2P54278 RARRES2P11-201ENST00000635158 484 ntBASIC20.89■□□□□ 0.93
PMS2P54278 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.89■□□□□ 0.93
PMS2P54278 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PMS2P54278 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PMS2P54278 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS2P54278 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS2P54278 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.89■□□□□ 0.93
PMS2P54278 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS2P54278 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PMS2P54278 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.89■□□□□ 0.93
PMS2P54278 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PMS2P54278 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.88■□□□□ 0.93
PMS2P54278 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PMS2P54278 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS2P54278 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PMS2P54278 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PMS2P54278 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PMS2P54278 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS2P54278 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS2P54278 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS2P54278 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS2P54278 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS2P54278 KRT18P5-201ENST00000436075 1291 ntBASIC20.88■□□□□ 0.93
PMS2P54278 AC090192.1-201ENST00000517740 490 ntBASIC20.88■□□□□ 0.93
PMS2P54278 AL137784.2-201ENST00000607332 1000 ntBASIC20.88■□□□□ 0.93
PMS2P54278 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PMS2P54278 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.88■□□□□ 0.93
PMS2P54278 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PMS2P54278 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.88■□□□□ 0.93
PMS2P54278 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PMS2P54278 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.88■□□□□ 0.93
PMS2P54278 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.88■□□□□ 0.93
PMS2P54278 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS2P54278 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.87■□□□□ 0.93
PMS2P54278 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.87■□□□□ 0.93
PMS2P54278 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS2P54278 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.87■□□□□ 0.93
PMS2P54278 EEF1DP3-203ENST00000566025 782 ntBASIC20.87■□□□□ 0.93
PMS2P54278 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.87■□□□□ 0.93
PMS2P54278 AC053503.5-201ENST00000601508 636 ntBASIC20.87■□□□□ 0.93
PMS2P54278 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.87■□□□□ 0.93
PMS2P54278 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS2P54278 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.87■□□□□ 0.93
PMS2P54278 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PMS2P54278 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS2P54278 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS2P54278 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PMS2P54278 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms