Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.49■■□□□ 1.03
CLCN4P51793 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CLCN4P51793 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.49■■□□□ 1.03
CLCN4P51793 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN4P51793 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN4P51793 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN4P51793 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN4P51793 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN4P51793 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN4P51793 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN4P51793 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.48■■□□□ 1.03
CLCN4P51793 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN4P51793 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
CLCN4P51793 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.48■■□□□ 1.03
CLCN4P51793 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN4P51793 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN4P51793 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN4P51793 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.48■■□□□ 1.03
CLCN4P51793 AC113410.3-201ENST00000623366 203 ntBASIC21.48■■□□□ 1.03
CLCN4P51793 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.48■■□□□ 1.03
CLCN4P51793 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN4P51793 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.48■■□□□ 1.03
CLCN4P51793 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN4P51793 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCN4P51793 LINC00565-201ENST00000562710 2331 ntBASIC21.47■■□□□ 1.03
CLCN4P51793 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
CLCN4P51793 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CLCN4P51793 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.47■■□□□ 1.03
CLCN4P51793 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.47■■□□□ 1.03
CLCN4P51793 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 RARRES2P10-201ENST00000564312 460 ntBASIC21.47■■□□□ 1.03
CLCN4P51793 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.47■■□□□ 1.03
CLCN4P51793 MIR4785-201ENST00000585005 73 ntBASIC21.47■■□□□ 1.03
CLCN4P51793 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CLCN4P51793 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.47■■□□□ 1.03
CLCN4P51793 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCN4P51793 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CLCN4P51793 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CLCN4P51793 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN4P51793 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCN4P51793 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CLCN4P51793 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.46■■□□□ 1.03
CLCN4P51793 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CLCN4P51793 MIR1224-201ENST00000408193 85 ntBASIC21.46■■□□□ 1.03
CLCN4P51793 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.46■■□□□ 1.03
CLCN4P51793 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.46■■□□□ 1.03
CLCN4P51793 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.46■■□□□ 1.03
CLCN4P51793 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.46■■□□□ 1.03
CLCN4P51793 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN4P51793 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN4P51793 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN4P51793 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CLCN4P51793 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN4P51793 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.45■■□□□ 1.02
CLCN4P51793 TSPY15P-201ENST00000457163 923 ntBASIC21.45■■□□□ 1.02
CLCN4P51793 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.45■■□□□ 1.02
CLCN4P51793 PRKY-204ENST00000533551 1019 ntBASIC21.45■■□□□ 1.02
CLCN4P51793 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.45■■□□□ 1.02
CLCN4P51793 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.45■■□□□ 1.02
CLCN4P51793 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.45■■□□□ 1.02
CLCN4P51793 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCN4P51793 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CLCN4P51793 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CLCN4P51793 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLCN4P51793 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.44■■□□□ 1.02
CLCN4P51793 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.44■■□□□ 1.02
CLCN4P51793 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.44■■□□□ 1.02
CLCN4P51793 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.44■■□□□ 1.02
CLCN4P51793 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.44■■□□□ 1.02
CLCN4P51793 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.44■■□□□ 1.02
CLCN4P51793 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.44■■□□□ 1.02
CLCN4P51793 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CLCN4P51793 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.44■■□□□ 1.02
CLCN4P51793 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.44■■□□□ 1.02
CLCN4P51793 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLCN4P51793 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CLCN4P51793 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms