Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YMR272W-AYMR272W-A 114 nt0.53□□□□□ -2.32
VPS55P47111 PGA1YNL158W 597 nt0.53□□□□□ -2.32
VPS55P47111 YOL150CYOL150C 312 nt0.53□□□□□ -2.32
VPS55P47111 SHS1YDL225W 1656 nt0.53□□□□□ -2.33
VPS55P47111 SEC5YDR166C 2916 nt0.52□□□□□ -2.33
VPS55P47111 YHL048C-AYHL048C-A 135 nt0.52□□□□□ -2.33
VPS55P47111 RFA3YJL173C 369 nt0.52□□□□□ -2.33
VPS55P47111 GRX8YLR364W 330 nt0.52□□□□□ -2.33
VPS55P47111 YMR031W-AYMR031W-A 327 nt0.52□□□□□ -2.33
VPS55P47111 RUF20RUF20 443 nt0.52□□□□□ -2.33
VPS55P47111 IRC23YOR044W 474 nt0.52□□□□□ -2.33
VPS55P47111 UTP20YBL004W 7482 nt0.52□□□□□ -2.33
VPS55P47111 tF(GAA)BtF(GAA)B 73 nt0.51□□□□□ -2.33
VPS55P47111 tF(GAA)FtF(GAA)F 73 nt0.51□□□□□ -2.33
VPS55P47111 tF(GAA)GtF(GAA)G 73 nt0.51□□□□□ -2.33
VPS55P47111 tF(GAA)H1tF(GAA)H1 73 nt0.51□□□□□ -2.33
VPS55P47111 tF(GAA)H2tF(GAA)H2 73 nt0.51□□□□□ -2.33
VPS55P47111 tF(GAA)MtF(GAA)M 73 nt0.51□□□□□ -2.33
VPS55P47111 tF(GAA)P1tF(GAA)P1 73 nt0.51□□□□□ -2.33
VPS55P47111 tF(GAA)P2tF(GAA)P2 73 nt0.51□□□□□ -2.33
VPS55P47111 KEG1YFR042W 603 nt0.51□□□□□ -2.33
VPS55P47111 NBL1YHR199C-A 222 nt0.51□□□□□ -2.33
VPS55P47111 STB6YKL072W 2301 nt0.51□□□□□ -2.33
VPS55P47111 YLR458WYLR458W 381 nt0.51□□□□□ -2.33
VPS55P47111 HHT1YBR010W 411 nt0.51□□□□□ -2.33
VPS55P47111 TIM18YOR297C 579 nt0.51□□□□□ -2.33
VPS55P47111 NUP157YER105C 4176 nt0.5□□□□□ -2.33
VPS55P47111 RTR1YER139C 681 nt0.5□□□□□ -2.33
VPS55P47111 URM1YIL008W 300 nt0.5□□□□□ -2.33
VPS55P47111 HIT1YJR055W 495 nt0.5□□□□□ -2.33
VPS55P47111 YNL179CYNL179C 438 nt0.5□□□□□ -2.33
VPS55P47111 YBL083CYBL083C 426 nt0.5□□□□□ -2.33
VPS55P47111 YOR161W-BYOR161W-B 261 nt0.5□□□□□ -2.33
VPS55P47111 YBR062CYBR062C 543 nt0.5□□□□□ -2.33
VPS55P47111 RKR1YMR247C 4689 nt0.5□□□□□ -2.33
VPS55P47111 YCR016WYCR016W 873 nt0.49□□□□□ -2.33
VPS55P47111 SLU7YDR088C 1149 nt0.49□□□□□ -2.33
VPS55P47111 YDR262WYDR262W 819 nt0.49□□□□□ -2.33
VPS55P47111 MMS21YEL019C 804 nt0.49□□□□□ -2.33
VPS55P47111 YAP3YHL009C 993 nt0.49□□□□□ -2.33
VPS55P47111 YKL115CYKL115C 393 nt0.49□□□□□ -2.33
VPS55P47111 RPC25YKL144C 639 nt0.49□□□□□ -2.33
VPS55P47111 RPL40BYKR094C 387 nt0.49□□□□□ -2.33
VPS55P47111 LST4YKL176C 2487 nt0.49□□□□□ -2.33
VPS55P47111 RAD50YNL250W 3939 nt0.49□□□□□ -2.33
VPS55P47111 SLX4YLR135W 2247 nt0.48□□□□□ -2.33
VPS55P47111 ESA1YOR244W 1338 nt0.48□□□□□ -2.33
VPS55P47111 YCR043CYCR043C 384 nt0.48□□□□□ -2.33
VPS55P47111 YER087C-AYER087C-A 552 nt0.48□□□□□ -2.33
VPS55P47111 YFL012W-AYFL012W-A 375 nt0.48□□□□□ -2.33
VPS55P47111 YGL217CYGL217C 342 nt0.48□□□□□ -2.33
VPS55P47111 YIR020CYIR020C 303 nt0.48□□□□□ -2.33
VPS55P47111 YLR042CYLR042C 486 nt0.48□□□□□ -2.33
VPS55P47111 SFG1YOR315W 1041 nt0.48□□□□□ -2.33
VPS55P47111 SWI4YER111C 3282 nt0.47□□□□□ -2.33
VPS55P47111 YDL073WYDL073W 2955 nt0.47□□□□□ -2.33
VPS55P47111 TSA2YDR453C 591 nt0.47□□□□□ -2.33
VPS55P47111 MIC19YFR011C 513 nt0.47□□□□□ -2.33
VPS55P47111 BTN2YGR142W 1233 nt0.47□□□□□ -2.33
VPS55P47111 LAG1YHL003C 1236 nt0.47□□□□□ -2.33
VPS55P47111 PHS1YJL097W 654 nt0.47□□□□□ -2.33
VPS55P47111 YLR031WYLR031W 561 nt0.47□□□□□ -2.33
VPS55P47111 BLS1YLR408C 369 nt0.47□□□□□ -2.33
VPS55P47111 RRP15YPR143W 753 nt0.47□□□□□ -2.33
VPS55P47111 AIM9YER080W 1884 nt0.47□□□□□ -2.33
VPS55P47111 NDD1YOR372C 1665 nt0.46□□□□□ -2.34
VPS55P47111 RSM28YDR494W 1086 nt0.46□□□□□ -2.34
VPS55P47111 COX8YLR395C 237 nt0.46□□□□□ -2.34
VPS55P47111 YMR173W-AYMR173W-A 1185 nt0.46□□□□□ -2.34
VPS55P47111 RPS10BYMR230W 318 nt0.46□□□□□ -2.34
VPS55P47111 SWS2YNL081C 432 nt0.46□□□□□ -2.34
VPS55P47111 NOT5YPR072W 1683 nt0.46□□□□□ -2.34
VPS55P47111 MZM1YDR493W 372 nt0.45□□□□□ -2.34
VPS55P47111 POP6YGR030C 477 nt0.45□□□□□ -2.34
VPS55P47111 ABM1YJR108W 372 nt0.45□□□□□ -2.34
VPS55P47111 DIA1YMR316W 1011 nt0.45□□□□□ -2.34
VPS55P47111 YNL010WYNL010W 726 nt0.45□□□□□ -2.34
VPS55P47111 BRX1YOL077C 876 nt0.45□□□□□ -2.34
VPS55P47111 YPR159C-AYPR159C-A 102 nt0.45□□□□□ -2.34
VPS55P47111 YML002WYML002W 2214 nt0.45□□□□□ -2.34
VPS55P47111 UTP10YJL109C 5310 nt0.45□□□□□ -2.34
VPS55P47111 LTE1YAL024C 4308 nt0.45□□□□□ -2.34
VPS55P47111 OSH6YKR003W 1347 nt0.44□□□□□ -2.34
VPS55P47111 YER147C-AYER147C-A 411 nt0.44□□□□□ -2.34
VPS55P47111 PPE1YHR075C 1203 nt0.44□□□□□ -2.34
VPS55P47111 YIR020C-BYIR020C-B 735 nt0.44□□□□□ -2.34
VPS55P47111 YOR032W-AYOR032W-A 201 nt0.44□□□□□ -2.34
VPS55P47111 SGO1YOR073W 1773 nt0.44□□□□□ -2.34
VPS55P47111 YCK3YER123W 1575 nt0.44□□□□□ -2.34
VPS55P47111 SWI6YLR182W 2412 nt0.44□□□□□ -2.34
VPS55P47111 SET3YKR029C 2256 nt0.43□□□□□ -2.34
VPS55P47111 VMA7YGR020C 357 nt0.43□□□□□ -2.34
VPS55P47111 IST3YIR005W 447 nt0.43□□□□□ -2.34
VPS55P47111 YKL145W-AYKL145W-A 93 nt0.43□□□□□ -2.34
VPS55P47111 RIO2YNL207W 1278 nt0.43□□□□□ -2.34
VPS55P47111 YOL024WYOL024W 519 nt0.43□□□□□ -2.34
VPS55P47111 YBR051WYBR051W 351 nt0.43□□□□□ -2.34
VPS55P47111 ATP15YPL271W 189 nt0.43□□□□□ -2.34
VPS55P47111 snR24snR24 89 nt0.43□□□□□ -2.34
VPS55P47111 GDS1YOR355W 1569 nt0.43□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms