Protein–RNA interactions for Protein: P46673

NUP85, Nucleoporin NUP85, yeastyeast

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP85P46673 YAK1YJL141C 2424 nt3.66□□□□□ -1.82
NUP85P46673 snR191snR191 274 nt3.66□□□□□ -1.82
NUP85P46673 NUP159YIL115C 4383 nt3.65□□□□□ -1.82
NUP85P46673 MSD1YPL104W 1977 nt3.65□□□□□ -1.82
NUP85P46673 RNR1YER070W 2667 nt3.65□□□□□ -1.82
NUP85P46673 NPR1YNL183C 2373 nt3.65□□□□□ -1.83
NUP85P46673 snR62snR62 100 nt3.65□□□□□ -1.83
NUP85P46673 YOL019W-AYOL019W-A 153 nt3.65□□□□□ -1.83
NUP85P46673 YOR333CYOR333C 417 nt3.65□□□□□ -1.83
NUP85P46673 CPA2YJR109C 3357 nt3.65□□□□□ -1.83
NUP85P46673 LRG1YDL240W 3054 nt3.65□□□□□ -1.83
NUP85P46673 KAR3YPR141C 2190 nt3.65□□□□□ -1.83
NUP85P46673 KAP95YLR347C 2586 nt3.64□□□□□ -1.83
NUP85P46673 RAD4YER162C 2265 nt3.64□□□□□ -1.83
NUP85P46673 SIP3YNL257C 3690 nt3.64□□□□□ -1.83
NUP85P46673 REG1YDR028C 3045 nt3.64□□□□□ -1.83
NUP85P46673 tS(GCU)Q1tS(GCU)Q1 86 nt3.64□□□□□ -1.83
NUP85P46673 COX19YLL018C-A 297 nt3.64□□□□□ -1.83
NUP85P46673 TRS120YDR407C 3870 nt3.64□□□□□ -1.83
NUP85P46673 CLN3YAL040C 1743 nt3.64□□□□□ -1.83
NUP85P46673 YGL140CYGL140C 3660 nt3.63□□□□□ -1.83
NUP85P46673 YDR193WYDR193W 399 nt3.63□□□□□ -1.83
NUP85P46673 RPS17BYDR447C 411 nt3.63□□□□□ -1.83
NUP85P46673 YIL174WYIL174W 228 nt3.63□□□□□ -1.83
NUP85P46673 YJL222W-AYJL222W-A 228 nt3.63□□□□□ -1.83
NUP85P46673 YLR154W-AYLR154W-A 186 nt3.63□□□□□ -1.83
NUP85P46673 YOR218CYOR218C 420 nt3.63□□□□□ -1.83
NUP85P46673 NOG1YPL093W 1944 nt3.63□□□□□ -1.83
NUP85P46673 DOT6YER088C 2013 nt3.63□□□□□ -1.83
NUP85P46673 ALK2YBL009W 2031 nt3.63□□□□□ -1.83
NUP85P46673 YNL211CYNL211C 261 nt3.62□□□□□ -1.83
NUP85P46673 MPT5YGL178W 2580 nt3.62□□□□□ -1.83
NUP85P46673 PAA1YDR071C 576 nt3.61□□□□□ -1.83
NUP85P46673 YGR051CYGR051C 324 nt3.61□□□□□ -1.83
NUP85P46673 YLR416CYLR416C 399 nt3.61□□□□□ -1.83
NUP85P46673 APE2YKL157W 2859 nt3.61□□□□□ -1.83
NUP85P46673 GPI13YLL031C 3054 nt3.61□□□□□ -1.83
NUP85P46673 EMC6YLL014W 327 nt3.6□□□□□ -1.83
NUP85P46673 YBR221W-AYBR221W-A 105 nt3.6□□□□□ -1.83
NUP85P46673 MCM10YIL150C 1716 nt3.6□□□□□ -1.83
NUP85P46673 RPN2YIL075C 2838 nt3.59□□□□□ -1.83
NUP85P46673 ZRG17YNR039C 1818 nt3.59□□□□□ -1.83
NUP85P46673 YDR464C-AYDR464C-A 189 nt3.59□□□□□ -1.83
NUP85P46673 YEL032C-AYEL032C-A 162 nt3.59□□□□□ -1.83
NUP85P46673 RSF2YJR127C 4143 nt3.59□□□□□ -1.84
NUP85P46673 SSM4YIL030C 3960 nt3.58□□□□□ -1.84
NUP85P46673 GIN4YDR507C 3429 nt3.58□□□□□ -1.84
NUP85P46673 CIN1YOR349W 3045 nt3.58□□□□□ -1.84
NUP85P46673 PAN3YKL025C 2040 nt3.58□□□□□ -1.84
NUP85P46673 RIX1YHR197W 2292 nt3.58□□□□□ -1.84
NUP85P46673 21S_rRNA21S_rRNA 3296 nt3.57□□□□□ -1.84
NUP85P46673 ATP7YKL016C 525 nt3.57□□□□□ -1.84
NUP85P46673 YBL065WYBL065W 345 nt3.57□□□□□ -1.84
NUP85P46673 VPS53YJL029C 2469 nt3.56□□□□□ -1.84
NUP85P46673 SQS1YNL224C 2304 nt3.56□□□□□ -1.84
NUP85P46673 TMA108YIL137C 2841 nt3.56□□□□□ -1.84
NUP85P46673 RPL25YOL127W 429 nt3.56□□□□□ -1.84
NUP85P46673 YOR072W-BYOR072W-B 162 nt3.56□□□□□ -1.84
NUP85P46673 RAD5YLR032W 3510 nt3.56□□□□□ -1.84
NUP85P46673 OST4YDL232W 111 nt3.55□□□□□ -1.84
NUP85P46673 RSM19YNR037C 276 nt3.55□□□□□ -1.84
NUP85P46673 JEN1YKL217W 1851 nt3.55□□□□□ -1.84
NUP85P46673 SPT6YGR116W 4356 nt3.55□□□□□ -1.84
NUP85P46673 ARO1YDR127W 4767 nt3.54□□□□□ -1.84
NUP85P46673 FAS1YKL182W 6156 nt3.54□□□□□ -1.84
NUP85P46673 NUP120YKL057C 3114 nt3.54□□□□□ -1.84
NUP85P46673 PTC5YOR090C 1719 nt3.54□□□□□ -1.84
NUP85P46673 RAM2YKL019W 951 nt3.54□□□□□ -1.84
NUP85P46673 RPS23BYPR132W 438 nt3.54□□□□□ -1.84
NUP85P46673 TOP1YOL006C 2310 nt3.54□□□□□ -1.84
NUP85P46673 PUF4YGL014W 2667 nt3.54□□□□□ -1.84
NUP85P46673 OSH3YHR073W 2991 nt3.54□□□□□ -1.84
NUP85P46673 CCM1YGR150C 2595 nt3.54□□□□□ -1.84
NUP85P46673 SET1YHR119W 3243 nt3.53□□□□□ -1.84
NUP85P46673 YDR239CYDR239C 2364 nt3.53□□□□□ -1.84
NUP85P46673 EFR3YMR212C 2349 nt3.53□□□□□ -1.84
NUP85P46673 SPT4YGR063C 309 nt3.53□□□□□ -1.84
NUP85P46673 RDS1YCR106W 2499 nt3.53□□□□□ -1.84
NUP85P46673 XRN1YGL173C 4587 nt3.53□□□□□ -1.85
NUP85P46673 FLO9YAL063C 3969 nt3.53□□□□□ -1.85
NUP85P46673 STU1YBL034C 4542 nt3.52□□□□□ -1.85
NUP85P46673 COG3YER157W 2406 nt3.52□□□□□ -1.85
NUP85P46673 SLA1YBL007C 3735 nt3.52□□□□□ -1.85
NUP85P46673 INP2YMR163C 2118 nt3.52□□□□□ -1.85
NUP85P46673 YFR012W-AYFR012W-A 87 nt3.52□□□□□ -1.85
NUP85P46673 RSC1YGR056W 2787 nt3.52□□□□□ -1.85
NUP85P46673 YJL070CYJL070C 2667 nt3.52□□□□□ -1.85
NUP85P46673 PRP22YER013W 3438 nt3.51□□□□□ -1.85
NUP85P46673 YPR022CYPR022C 3402 nt3.51□□□□□ -1.85
NUP85P46673 RTC6YPL183W-A 282 nt3.51□□□□□ -1.85
NUP85P46673 SNT1YCR033W 3681 nt3.51□□□□□ -1.85
NUP85P46673 RRM3YHR031C 2172 nt3.51□□□□□ -1.85
NUP85P46673 DUF1YOL087C 3351 nt3.5□□□□□ -1.85
NUP85P46673 CMC4YMR194C-B 222 nt3.5□□□□□ -1.85
NUP85P46673 HAL9YOL089C 3093 nt3.5□□□□□ -1.85
NUP85P46673 YCG1YDR325W 3108 nt3.5□□□□□ -1.85
NUP85P46673 COS111YBR203W 2775 nt3.49□□□□□ -1.85
NUP85P46673 NAB3YPL190C 2409 nt3.49□□□□□ -1.85
NUP85P46673 RPL22AYLR061W 366 nt3.49□□□□□ -1.85
NUP85P46673 GRX8YLR364W 330 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 56.2 ms