Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC1A1P43005 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A1P43005 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC1A1P43005 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC1A1P43005 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A1P43005 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A1P43005 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC1A1P43005 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.26■□□□□ 0.99
SLC1A1P43005 PGM5P4-201ENST00000421970 445 ntBASIC21.26■□□□□ 0.99
SLC1A1P43005 AC034268.1-201ENST00000441047 882 ntBASIC21.26■□□□□ 0.99
SLC1A1P43005 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A1P43005 TERF1P5-201ENST00000477545 1207 ntBASIC21.26■□□□□ 0.99
SLC1A1P43005 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC1A1P43005 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC1A1P43005 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A1P43005 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC1A1P43005 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A1P43005 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A1P43005 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SLC1A1P43005 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC1A1P43005 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC1A1P43005 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
SLC1A1P43005 AFG3L1P-217ENST00000557444 2447 ntBASIC21.26■□□□□ 0.99
SLC1A1P43005 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
SLC1A1P43005 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A1P43005 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A1P43005 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SLC1A1P43005 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SLC1A1P43005 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SLC1A1P43005 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC1A1P43005 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC1A1P43005 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SLC1A1P43005 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC1A1P43005 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC1A1P43005 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A1P43005 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SLC1A1P43005 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SLC1A1P43005 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
SLC1A1P43005 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC1A1P43005 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC1A1P43005 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC1A1P43005 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC1A1P43005 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC1A1P43005 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC1A1P43005 AL591742.1-201ENST00000604433 565 ntBASIC21.24■□□□□ 0.99
SLC1A1P43005 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 AC010536.3-201ENST00000620306 533 ntBASIC21.24■□□□□ 0.99
SLC1A1P43005 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC1A1P43005 DPP3P2-201ENST00000416030 1696 ntBASIC21.24■□□□□ 0.99
SLC1A1P43005 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A1P43005 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC1A1P43005 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC1A1P43005 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.23■□□□□ 0.99
SLC1A1P43005 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 AL162412.1-201ENST00000567129 965 ntBASIC21.23■□□□□ 0.99
SLC1A1P43005 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC1A1P43005 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A1P43005 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC1A1P43005 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SLC1A1P43005 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC1A1P43005 KRT18P11-201ENST00000435214 1283 ntBASIC21.22■□□□□ 0.99
SLC1A1P43005 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms