Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC008175.2-201ENST00000612840 297 ntBASIC13.66□□□□□ -0.22
CXCL5P42830 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCL5P42830 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCL5P42830 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.66□□□□□ -0.22
CXCL5P42830 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCL5P42830 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL5P42830 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL5P42830 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL5P42830 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL5P42830 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CXCL5P42830 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL5P42830 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCL5P42830 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL5P42830 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CXCL5P42830 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CXCL5P42830 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CXCL5P42830 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CXCL5P42830 AC018445.3-201ENST00000624177 1945 ntBASIC13.64□□□□□ -0.23
CXCL5P42830 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CXCL5P42830 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCL5P42830 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCL5P42830 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCL5P42830 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCL5P42830 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.64□□□□□ -0.23
CXCL5P42830 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CXCL5P42830 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 POU5F1P4-201ENST00000413175 1085 ntBASIC13.64□□□□□ -0.23
CXCL5P42830 AC131281.2-201ENST00000520478 145 ntBASIC13.64□□□□□ -0.23
CXCL5P42830 EEF1DP3-203ENST00000566025 782 ntBASIC13.64□□□□□ -0.23
CXCL5P42830 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCL5P42830 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CXCL5P42830 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CXCL5P42830 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CXCL5P42830 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.64□□□□□ -0.23
CXCL5P42830 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL5P42830 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CXCL5P42830 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CXCL5P42830 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCL5P42830 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CXCL5P42830 AL512408.1-201ENST00000569378 2000 ntBASIC13.63□□□□□ -0.23
CXCL5P42830 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCL5P42830 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCL5P42830 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CXCL5P42830 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCL5P42830 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCL5P42830 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CXCL5P42830 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCL5P42830 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCL5P42830 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CXCL5P42830 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.63□□□□□ -0.23
CXCL5P42830 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CXCL5P42830 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.63□□□□□ -0.23
CXCL5P42830 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CXCL5P42830 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CXCL5P42830 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.63□□□□□ -0.23
CXCL5P42830 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CXCL5P42830 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms