Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 YGR266WYGR266W 2106 nt5.06□□□□□ -1.6
PTP3P40048 FAR1YJL157C 2493 nt5.06□□□□□ -1.6
PTP3P40048 ECM22YLR228C 2445 nt5.06□□□□□ -1.6
PTP3P40048 YGR051CYGR051C 324 nt5.06□□□□□ -1.6
PTP3P40048 LSO2YGR169C-A 279 nt5.06□□□□□ -1.6
PTP3P40048 COX19YLL018C-A 297 nt5.06□□□□□ -1.6
PTP3P40048 VMA9YCL005W-A 222 nt5.06□□□□□ -1.6
PTP3P40048 SEC15YGL233W 2733 nt5.06□□□□□ -1.6
PTP3P40048 YJL206CYJL206C 2277 nt5.05□□□□□ -1.6
PTP3P40048 RAD5YLR032W 3510 nt5.05□□□□□ -1.6
PTP3P40048 PTC5YOR090C 1719 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)CtK(CUU)C 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)D1tK(CUU)D1 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)D2tK(CUU)D2 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)E1tK(CUU)E1 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)E2tK(CUU)E2 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)FtK(CUU)F 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)G1tK(CUU)G1 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)G2tK(CUU)G2 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)G3tK(CUU)G3 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)ItK(CUU)I 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)JtK(CUU)J 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)KtK(CUU)K 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)MtK(CUU)M 73 nt5.04□□□□□ -1.6
PTP3P40048 tK(CUU)PtK(CUU)P 73 nt5.04□□□□□ -1.6
PTP3P40048 RLI1YDR091C 1827 nt5.04□□□□□ -1.6
PTP3P40048 MPT5YGL178W 2580 nt5.04□□□□□ -1.6
PTP3P40048 YDR034C-DYDR034C-D 5313 nt5.03□□□□□ -1.6
PTP3P40048 NOP4YPL043W 2058 nt5.03□□□□□ -1.6
PTP3P40048 YOR072W-BYOR072W-B 162 nt5.03□□□□□ -1.6
PTP3P40048 SGD1YLR336C 2700 nt5.02□□□□□ -1.61
PTP3P40048 YFR012W-AYFR012W-A 87 nt5.02□□□□□ -1.61
PTP3P40048 RPN2YIL075C 2838 nt5.02□□□□□ -1.61
PTP3P40048 NPR3YHL023C 3441 nt5.02□□□□□ -1.61
PTP3P40048 MCD4YKL165C 2760 nt5.02□□□□□ -1.61
PTP3P40048 SKP2YNL311C 2292 nt5.02□□□□□ -1.61
PTP3P40048 VAS1YGR094W 3315 nt5.02□□□□□ -1.61
PTP3P40048 YDR239CYDR239C 2364 nt5.01□□□□□ -1.61
PTP3P40048 AXL2YIL140W 2472 nt5.01□□□□□ -1.61
PTP3P40048 RIX1YHR197W 2292 nt5.01□□□□□ -1.61
PTP3P40048 YER187WYER187W 426 nt5.01□□□□□ -1.61
PTP3P40048 INP2YMR163C 2118 nt5.01□□□□□ -1.61
PTP3P40048 YBL065WYBL065W 345 nt5.01□□□□□ -1.61
PTP3P40048 STF2YGR008C 255 nt5□□□□□ -1.61
PTP3P40048 PUF4YGL014W 2667 nt5□□□□□ -1.61
PTP3P40048 YJL070CYJL070C 2667 nt5□□□□□ -1.61
PTP3P40048 MYO5YMR109W 3660 nt5□□□□□ -1.61
PTP3P40048 NCA2YPR155C 1851 nt4.99□□□□□ -1.61
PTP3P40048 EFR3YMR212C 2349 nt4.99□□□□□ -1.61
PTP3P40048 BCH1YMR237W 2175 nt4.99□□□□□ -1.61
PTP3P40048 SYT1YPR095C 3681 nt4.98□□□□□ -1.61
PTP3P40048 MET4YNL103W 2019 nt4.97□□□□□ -1.61
PTP3P40048 PRP22YER013W 3438 nt4.97□□□□□ -1.61
PTP3P40048 YBR174CYBR174C 315 nt4.97□□□□□ -1.61
PTP3P40048 CRT10YOL063C 2874 nt4.97□□□□□ -1.61
PTP3P40048 YFR016CYFR016C 3702 nt4.97□□□□□ -1.61
PTP3P40048 NAB3YPL190C 2409 nt4.96□□□□□ -1.61
PTP3P40048 SLA1YBL007C 3735 nt4.96□□□□□ -1.62
PTP3P40048 NTO1YPR031W 2247 nt4.95□□□□□ -1.62
PTP3P40048 NET1YJL076W 3570 nt4.95□□□□□ -1.62
PTP3P40048 YLR296WYLR296W 327 nt4.95□□□□□ -1.62
PTP3P40048 SEG1YMR086W 2883 nt4.95□□□□□ -1.62
PTP3P40048 YDR210W-BYDR210W-B 5313 nt4.94□□□□□ -1.62
PTP3P40048 YDR261W-BYDR261W-B 5313 nt4.94□□□□□ -1.62
PTP3P40048 YFL002W-AYFL002W-A 5313 nt4.94□□□□□ -1.62
PTP3P40048 YGR161W-BYGR161W-B 5313 nt4.94□□□□□ -1.62
PTP3P40048 YLR410W-BYLR410W-B 5313 nt4.94□□□□□ -1.62
PTP3P40048 YCL019WYCL019W 5313 nt4.94□□□□□ -1.62
PTP3P40048 RRM3YHR031C 2172 nt4.94□□□□□ -1.62
PTP3P40048 DAL81YIR023W 2913 nt4.93□□□□□ -1.62
PTP3P40048 SKG6YHR149C 2205 nt4.93□□□□□ -1.62
PTP3P40048 TAF6YGL112C 1551 nt4.92□□□□□ -1.62
PTP3P40048 YGR050CYGR050C 357 nt4.92□□□□□ -1.62
PTP3P40048 GRX8YLR364W 330 nt4.91□□□□□ -1.62
PTP3P40048 ELG1YOR144C 2376 nt4.91□□□□□ -1.62
PTP3P40048 SPO75YLL005C 2607 nt4.91□□□□□ -1.62
PTP3P40048 VPH1YOR270C 2523 nt4.9□□□□□ -1.62
PTP3P40048 RTC6YPL183W-A 282 nt4.9□□□□□ -1.63
PTP3P40048 MPH1YIR002C 2982 nt4.9□□□□□ -1.63
PTP3P40048 PSK2YOL045W 3306 nt4.89□□□□□ -1.63
PTP3P40048 SNT1YCR033W 3681 nt4.89□□□□□ -1.63
PTP3P40048 BOI1YBL085W 2943 nt4.89□□□□□ -1.63
PTP3P40048 YGL014C-AYGL014C-A 162 nt4.89□□□□□ -1.63
PTP3P40048 YAL064W-BYAL064W-B 381 nt4.89□□□□□ -1.63
PTP3P40048 CMC4YMR194C-B 222 nt4.89□□□□□ -1.63
PTP3P40048 APL5YPL195W 2799 nt4.89□□□□□ -1.63
PTP3P40048 AHC1YOR023C 1701 nt4.89□□□□□ -1.63
PTP3P40048 YCR087C-AYCR087C-A 462 nt4.88□□□□□ -1.63
PTP3P40048 snR43snR43 209 nt4.88□□□□□ -1.63
PTP3P40048 YPR022CYPR022C 3402 nt4.88□□□□□ -1.63
PTP3P40048 PEP5YMR231W 3090 nt4.87□□□□□ -1.63
PTP3P40048 NIP100YPL174C 2607 nt4.87□□□□□ -1.63
PTP3P40048 YDL196WYDL196W 330 nt4.87□□□□□ -1.63
PTP3P40048 tL(UAA)QtL(UAA)Q 85 nt4.87□□□□□ -1.63
PTP3P40048 RPL25YOL127W 429 nt4.87□□□□□ -1.63
PTP3P40048 YCL046WYCL046W 324 nt4.87□□□□□ -1.63
PTP3P40048 RPO31YOR116C 4383 nt4.87□□□□□ -1.63
PTP3P40048 BLM10YFL007W 6432 nt4.87□□□□□ -1.63
PTP3P40048 PAN1YIR006C 4443 nt4.86□□□□□ -1.63
PTP3P40048 GIS4YML006C 2325 nt4.86□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms