Protein–RNA interactions for Protein: P36222

CHI3L1, Chitinase-3-like protein 1, humanhuman

Predicted RBP Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1P36222 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.2■□□□□ 0.66
CHI3L1P36222 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.2■□□□□ 0.66
CHI3L1P36222 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHI3L1P36222 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHI3L1P36222 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.19■□□□□ 0.66
CHI3L1P36222 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHI3L1P36222 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHI3L1P36222 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHI3L1P36222 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.19■□□□□ 0.66
CHI3L1P36222 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.19■□□□□ 0.66
CHI3L1P36222 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHI3L1P36222 AC112907.3-201ENST00000577781 2400 ntBASIC19.19■□□□□ 0.66
CHI3L1P36222 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHI3L1P36222 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHI3L1P36222 ZNRF2P3-201ENST00000424200 374 ntBASIC19.19■□□□□ 0.66
CHI3L1P36222 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHI3L1P36222 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.19■□□□□ 0.66
CHI3L1P36222 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.19■□□□□ 0.66
CHI3L1P36222 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
CHI3L1P36222 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHI3L1P36222 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.19■□□□□ 0.66
CHI3L1P36222 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHI3L1P36222 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHI3L1P36222 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.19■□□□□ 0.66
CHI3L1P36222 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHI3L1P36222 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.19■□□□□ 0.66
CHI3L1P36222 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHI3L1P36222 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.18■□□□□ 0.66
CHI3L1P36222 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHI3L1P36222 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHI3L1P36222 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.18■□□□□ 0.66
CHI3L1P36222 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CHI3L1P36222 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHI3L1P36222 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHI3L1P36222 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHI3L1P36222 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHI3L1P36222 KRT19P1-201ENST00000405746 1186 ntBASIC19.18■□□□□ 0.66
CHI3L1P36222 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.18■□□□□ 0.66
CHI3L1P36222 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.18■□□□□ 0.66
CHI3L1P36222 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHI3L1P36222 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHI3L1P36222 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.18■□□□□ 0.66
CHI3L1P36222 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHI3L1P36222 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.18■□□□□ 0.66
CHI3L1P36222 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHI3L1P36222 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHI3L1P36222 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHI3L1P36222 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.17■□□□□ 0.66
CHI3L1P36222 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.17■□□□□ 0.66
CHI3L1P36222 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHI3L1P36222 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHI3L1P36222 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHI3L1P36222 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHI3L1P36222 AC007322.3-201ENST00000426526 701 ntBASIC19.17■□□□□ 0.66
CHI3L1P36222 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHI3L1P36222 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.17■□□□□ 0.66
CHI3L1P36222 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.17■□□□□ 0.66
CHI3L1P36222 AC243732.1-201ENST00000612648 864 ntBASIC19.17■□□□□ 0.66
CHI3L1P36222 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHI3L1P36222 AC099778.1-201ENST00000568593 1911 ntBASIC19.17■□□□□ 0.66
CHI3L1P36222 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHI3L1P36222 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHI3L1P36222 RBM17P2-201ENST00000616397 1405 ntBASIC19.17■□□□□ 0.66
CHI3L1P36222 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.16■□□□□ 0.66
CHI3L1P36222 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHI3L1P36222 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.16■□□□□ 0.66
CHI3L1P36222 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.16■□□□□ 0.66
CHI3L1P36222 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.16■□□□□ 0.66
CHI3L1P36222 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.16■□□□□ 0.66
CHI3L1P36222 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.16■□□□□ 0.66
CHI3L1P36222 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.16■□□□□ 0.66
CHI3L1P36222 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.16■□□□□ 0.66
CHI3L1P36222 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.16■□□□□ 0.66
CHI3L1P36222 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHI3L1P36222 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.16■□□□□ 0.66
CHI3L1P36222 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.16■□□□□ 0.66
CHI3L1P36222 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHI3L1P36222 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHI3L1P36222 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHI3L1P36222 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
CHI3L1P36222 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHI3L1P36222 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHI3L1P36222 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHI3L1P36222 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.15■□□□□ 0.66
CHI3L1P36222 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHI3L1P36222 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.15■□□□□ 0.66
CHI3L1P36222 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.15■□□□□ 0.66
CHI3L1P36222 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms