Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGCLP35914 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.27■□□□□ 0.84
HMGCLP35914 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HMGCLP35914 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.27■□□□□ 0.84
HMGCLP35914 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGCLP35914 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGCLP35914 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGCLP35914 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HMGCLP35914 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLP35914 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLP35914 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGCLP35914 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLP35914 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HMGCLP35914 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HMGCLP35914 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
HMGCLP35914 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGCLP35914 MIR4758-201ENST00000577688 71 ntBASIC20.26■□□□□ 0.83
HMGCLP35914 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
HMGCLP35914 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.26■□□□□ 0.83
HMGCLP35914 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.26■□□□□ 0.83
HMGCLP35914 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLP35914 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGCLP35914 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.26■□□□□ 0.83
HMGCLP35914 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLP35914 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLP35914 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCLP35914 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGCLP35914 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGCLP35914 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HMGCLP35914 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLP35914 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLP35914 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLP35914 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLP35914 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLP35914 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGCLP35914 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HMGCLP35914 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.25■□□□□ 0.83
HMGCLP35914 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGCLP35914 HLA-L-209ENST00000420110 1011 ntBASIC20.25■□□□□ 0.83
HMGCLP35914 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.25■□□□□ 0.83
HMGCLP35914 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLP35914 AC142086.2-201ENST00000569753 217 ntBASIC20.25■□□□□ 0.83
HMGCLP35914 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.25■□□□□ 0.83
HMGCLP35914 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HMGCLP35914 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLP35914 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLP35914 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGCLP35914 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLP35914 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HMGCLP35914 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCLP35914 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGCLP35914 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HMGCLP35914 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLP35914 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLP35914 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLP35914 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.24■□□□□ 0.83
HMGCLP35914 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HMGCLP35914 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HMGCLP35914 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLP35914 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGCLP35914 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HMGCLP35914 AC073210.2-201ENST00000430369 194 ntBASIC20.24■□□□□ 0.83
HMGCLP35914 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
HMGCLP35914 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGCLP35914 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
HMGCLP35914 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.24■□□□□ 0.83
HMGCLP35914 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HMGCLP35914 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLP35914 LINC01006-201ENST00000333319 2292 ntBASIC20.24■□□□□ 0.83
HMGCLP35914 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGCLP35914 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLP35914 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGCLP35914 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGCLP35914 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HMGCLP35914 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLP35914 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.23■□□□□ 0.83
HMGCLP35914 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.23■□□□□ 0.83
HMGCLP35914 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLP35914 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.23■□□□□ 0.83
HMGCLP35914 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCLP35914 AL138781.1-201ENST00000566567 1274 ntBASIC20.23■□□□□ 0.83
HMGCLP35914 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCLP35914 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCLP35914 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLP35914 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLP35914 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HMGCLP35914 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGCLP35914 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGCLP35914 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.23■□□□□ 0.83
HMGCLP35914 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLP35914 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLP35914 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGCLP35914 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.22■□□□□ 0.83
HMGCLP35914 C2orf69P4-201ENST00000565394 541 ntBASIC20.22■□□□□ 0.83
HMGCLP35914 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HMGCLP35914 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.22■□□□□ 0.83
HMGCLP35914 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGCLP35914 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HMGCLP35914 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGCLP35914 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms