Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AC010536.3-201ENST00000620306 533 ntBASIC21.02■□□□□ 0.96
PTPN7P35236 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.02■□□□□ 0.96
PTPN7P35236 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN7P35236 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN7P35236 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN7P35236 AC087633.2-202ENST00000565166 1439 ntBASIC21.02■□□□□ 0.96
PTPN7P35236 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PTPN7P35236 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PTPN7P35236 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
PTPN7P35236 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 PGM5P4-201ENST00000421970 445 ntBASIC21.01■□□□□ 0.95
PTPN7P35236 AC034268.1-201ENST00000441047 882 ntBASIC21.01■□□□□ 0.95
PTPN7P35236 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.01■□□□□ 0.95
PTPN7P35236 AC007322.4-201ENST00000509611 723 ntBASIC21.01■□□□□ 0.95
PTPN7P35236 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.01■□□□□ 0.95
PTPN7P35236 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PTPN7P35236 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN7P35236 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PTPN7P35236 AFG3L1P-217ENST00000557444 2447 ntBASIC21■□□□□ 0.95
PTPN7P35236 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21■□□□□ 0.95
PTPN7P35236 DPP3P2-201ENST00000416030 1696 ntBASIC21■□□□□ 0.95
PTPN7P35236 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PTPN7P35236 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21■□□□□ 0.95
PTPN7P35236 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21■□□□□ 0.95
PTPN7P35236 AL591742.1-201ENST00000604433 565 ntBASIC21■□□□□ 0.95
PTPN7P35236 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21■□□□□ 0.95
PTPN7P35236 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
PTPN7P35236 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21■□□□□ 0.95
PTPN7P35236 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21■□□□□ 0.95
PTPN7P35236 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN7P35236 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN7P35236 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN7P35236 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN7P35236 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN7P35236 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 MIR6821-201ENST00000617625 74 ntBASIC20.99■□□□□ 0.95
PTPN7P35236 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN7P35236 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN7P35236 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PTPN7P35236 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN7P35236 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN7P35236 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN7P35236 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN7P35236 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN7P35236 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN7P35236 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN7P35236 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN7P35236 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
PTPN7P35236 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN7P35236 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN7P35236 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PTPN7P35236 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PTPN7P35236 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN7P35236 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.98■□□□□ 0.95
PTPN7P35236 AL356652.1-201ENST00000615962 565 ntBASIC20.98■□□□□ 0.95
PTPN7P35236 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PTPN7P35236 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN7P35236 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPN7P35236 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN7P35236 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN7P35236 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
PTPN7P35236 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms