Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YPR158W-AYPR158W-A 1323 nt0.8□□□□□ -2.28
CDC39P25655 PXA2YKL188C 2562 nt0.8□□□□□ -2.28
CDC39P25655 NDD1YOR372C 1665 nt0.8□□□□□ -2.28
CDC39P25655 YER087C-AYER087C-A 552 nt0.8□□□□□ -2.28
CDC39P25655 THG1YGR024C 714 nt0.8□□□□□ -2.28
CDC39P25655 TIF11YMR260C 462 nt0.8□□□□□ -2.28
CDC39P25655 HHT2YNL031C 411 nt0.8□□□□□ -2.28
CDC39P25655 FYV6YNL133C 522 nt0.8□□□□□ -2.28
CDC39P25655 MDS3YGL197W 4464 nt0.8□□□□□ -2.28
CDC39P25655 YER088C-AYER088C-A 324 nt0.79□□□□□ -2.28
CDC39P25655 YAP3YHL009C 993 nt0.79□□□□□ -2.28
CDC39P25655 YIR020C-BYIR020C-B 735 nt0.79□□□□□ -2.28
CDC39P25655 ALK1YGL021W 2283 nt0.79□□□□□ -2.28
CDC39P25655 YGL217CYGL217C 342 nt0.79□□□□□ -2.28
CDC39P25655 YJL022WYJL022W 309 nt0.79□□□□□ -2.28
CDC39P25655 ERP4YOR016C 624 nt0.79□□□□□ -2.28
CDC39P25655 PET123YOR158W 957 nt0.79□□□□□ -2.28
CDC39P25655 RLM1YPL089C 2031 nt0.79□□□□□ -2.28
CDC39P25655 YJR003CYJR003C 1560 nt0.78□□□□□ -2.28
CDC39P25655 YHR214W-AYHR214W-A 486 nt0.78□□□□□ -2.28
CDC39P25655 YAR068WYAR068W 486 nt0.78□□□□□ -2.28
CDC39P25655 ATG16YMR159C 453 nt0.78□□□□□ -2.28
CDC39P25655 LST4YKL176C 2487 nt0.77□□□□□ -2.29
CDC39P25655 SPC110YDR356W 2835 nt0.77□□□□□ -2.29
CDC39P25655 SMC4YLR086W 4257 nt0.77□□□□□ -2.29
CDC39P25655 IRC2YDR112W 309 nt0.77□□□□□ -2.29
CDC39P25655 YER158W-AYER158W-A 216 nt0.77□□□□□ -2.29
CDC39P25655 15S_rRNA15S_rRNA 1649 nt0.77□□□□□ -2.29
CDC39P25655 YNL284C-BYNL284C-B 5268 nt0.77□□□□□ -2.29
CDC39P25655 TIM18YOR297C 579 nt0.76□□□□□ -2.29
CDC39P25655 SPT7YBR081C 3999 nt0.76□□□□□ -2.29
CDC39P25655 RPC25YKL144C 639 nt0.76□□□□□ -2.29
CDC39P25655 YMR321CYMR321C 318 nt0.76□□□□□ -2.29
CDC39P25655 SFG1YOR315W 1041 nt0.76□□□□□ -2.29
CDC39P25655 UFD2YDL190C 2886 nt0.76□□□□□ -2.29
CDC39P25655 NOT5YPR072W 1683 nt0.75□□□□□ -2.29
CDC39P25655 UBP3YER151C 2739 nt0.75□□□□□ -2.29
CDC39P25655 MMS22YLR320W 4365 nt0.75□□□□□ -2.29
CDC39P25655 GIM5YML094W 492 nt0.75□□□□□ -2.29
CDC39P25655 UBC7YMR022W 498 nt0.75□□□□□ -2.29
CDC39P25655 MUD2YKL074C 1584 nt0.75□□□□□ -2.29
CDC39P25655 YMR031W-AYMR031W-A 327 nt0.74□□□□□ -2.29
CDC39P25655 PGA1YNL158W 597 nt0.74□□□□□ -2.29
CDC39P25655 YNL226WYNL226W 411 nt0.74□□□□□ -2.29
CDC39P25655 TYE7YOR344C 876 nt0.74□□□□□ -2.29
CDC39P25655 CDC27YBL084C 2277 nt0.74□□□□□ -2.29
CDC39P25655 VAM6YDL077C 3150 nt0.74□□□□□ -2.29
CDC39P25655 SLS1YLR139C 1932 nt0.74□□□□□ -2.29
CDC39P25655 DAD1YDR016C 285 nt0.74□□□□□ -2.29
CDC39P25655 MCM22YJR135C 720 nt0.74□□□□□ -2.29
CDC39P25655 ATP18YML081C-A 180 nt0.74□□□□□ -2.29
CDC39P25655 PHO80YOL001W 882 nt0.73□□□□□ -2.29
CDC39P25655 MGR1YCL044C 1254 nt0.73□□□□□ -2.29
CDC39P25655 FIG4YNL325C 2640 nt0.73□□□□□ -2.29
CDC39P25655 NUP157YER105C 4176 nt0.73□□□□□ -2.29
CDC39P25655 MTC7YEL033W 420 nt0.73□□□□□ -2.29
CDC39P25655 EMT1tM(CAU)D 73 nt0.73□□□□□ -2.29
CDC39P25655 EMT5tM(CAU)J1 73 nt0.73□□□□□ -2.29
CDC39P25655 EMT3tM(CAU)J2 73 nt0.73□□□□□ -2.29
CDC39P25655 EMT4tM(CAU)M 73 nt0.73□□□□□ -2.29
CDC39P25655 EMT2tM(CAU)O2 73 nt0.73□□□□□ -2.29
CDC39P25655 GPX1YKL026C 504 nt0.73□□□□□ -2.29
CDC39P25655 IRC13YOR235W 315 nt0.73□□□□□ -2.29
CDC39P25655 COX1Q0045 1605 nt0.72□□□□□ -2.29
CDC39P25655 SEC3YER008C 4011 nt0.72□□□□□ -2.29
CDC39P25655 RTR2YDR066C 591 nt0.72□□□□□ -2.29
CDC39P25655 SMB1YER029C 591 nt0.72□□□□□ -2.29
CDC39P25655 FAR7YFR008W 666 nt0.72□□□□□ -2.29
CDC39P25655 CIC1YHR052W 1131 nt0.72□□□□□ -2.29
CDC39P25655 URA10YMR271C 684 nt0.72□□□□□ -2.29
CDC39P25655 OST2YOR103C 393 nt0.72□□□□□ -2.29
CDC39P25655 KAR9YPL269W 1935 nt0.72□□□□□ -2.29
CDC39P25655 NCA2YPR155C 1851 nt0.72□□□□□ -2.29
CDC39P25655 IPI3YNL182C 1668 nt0.72□□□□□ -2.29
CDC39P25655 YDL009CYDL009C 324 nt0.71□□□□□ -2.3
CDC39P25655 GPM2YDL021W 936 nt0.71□□□□□ -2.3
CDC39P25655 RPI1YIL119C 1224 nt0.71□□□□□ -2.3
CDC39P25655 GPX2YBR244W 489 nt0.71□□□□□ -2.3
CDC39P25655 PEP3YLR148W 2757 nt0.71□□□□□ -2.3
CDC39P25655 YDR042CYDR042C 603 nt0.71□□□□□ -2.3
CDC39P25655 TMA20YER007C-A 546 nt0.71□□□□□ -2.3
CDC39P25655 GRX8YLR364W 330 nt0.71□□□□□ -2.3
CDC39P25655 YOL085W-AYOL085W-A 213 nt0.71□□□□□ -2.3
CDC39P25655 UTP13YLR222C 2454 nt0.71□□□□□ -2.3
CDC39P25655 SLX4YLR135W 2247 nt0.7□□□□□ -2.3
CDC39P25655 KAR3YPR141C 2190 nt0.7□□□□□ -2.3
CDC39P25655 HTB1YDR224C 396 nt0.7□□□□□ -2.3
CDC39P25655 YGL042CYGL042C 306 nt0.7□□□□□ -2.3
CDC39P25655 ROX1YPR065W 1107 nt0.7□□□□□ -2.3
CDC39P25655 SGD1YLR336C 2700 nt0.7□□□□□ -2.3
CDC39P25655 OSH6YKR003W 1347 nt0.7□□□□□ -2.3
CDC39P25655 RAD50YNL250W 3939 nt0.7□□□□□ -2.3
CDC39P25655 YDR248CYDR248C 582 nt0.7□□□□□ -2.3
CDC39P25655 MIC19YFR011C 513 nt0.7□□□□□ -2.3
CDC39P25655 RPL16AYIL133C 600 nt0.7□□□□□ -2.3
CDC39P25655 RPS30AYLR287C-A 192 nt0.7□□□□□ -2.3
CDC39P25655 YGR270C-AYGR270C-A 219 nt0.69□□□□□ -2.3
CDC39P25655 EMC5YIL027C 426 nt0.69□□□□□ -2.3
CDC39P25655 RPL40BYKR094C 387 nt0.69□□□□□ -2.3
CDC39P25655 YLR163W-AYLR163W-A 114 nt0.69□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms