Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CHMP24386 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP24386 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP24386 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP24386 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHMP24386 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP24386 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
CHMP24386 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP24386 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP24386 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CHMP24386 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP24386 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP24386 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP24386 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP24386 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP24386 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP24386 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP24386 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP24386 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHMP24386 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.94■□□□□ 0.62
CHMP24386 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHMP24386 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMP24386 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 AC061975.6-201ENST00000579045 1553 ntBASIC18.94■□□□□ 0.62
CHMP24386 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMP24386 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.94■□□□□ 0.62
CHMP24386 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.94■□□□□ 0.62
CHMP24386 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHMP24386 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHMP24386 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.94■□□□□ 0.62
CHMP24386 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CHMP24386 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMP24386 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.94■□□□□ 0.62
CHMP24386 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP24386 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.93■□□□□ 0.62
CHMP24386 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP24386 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP24386 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP24386 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
CHMP24386 ID1-201ENST00000376105 1233 ntBASIC18.93■□□□□ 0.62
CHMP24386 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP24386 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.93■□□□□ 0.62
CHMP24386 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP24386 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHMP24386 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP24386 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP24386 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHMP24386 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMP24386 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHMP24386 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 AC112907.3-201ENST00000577781 2400 ntBASIC18.92■□□□□ 0.62
CHMP24386 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMP24386 AL162377.1-201ENST00000618844 1793 ntBASIC18.92■□□□□ 0.62
CHMP24386 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CHMP24386 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 AC007322.1-201ENST00000426983 750 ntBASIC18.92■□□□□ 0.62
CHMP24386 TERF1P5-201ENST00000477545 1207 ntBASIC18.92■□□□□ 0.62
CHMP24386 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMP24386 AC013268.1-206ENST00000638368 961 ntBASIC18.92■□□□□ 0.62
CHMP24386 AC112229.1-201ENST00000639295 961 ntBASIC18.92■□□□□ 0.62
CHMP24386 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms