Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 ROG1YGL144C 2058 nt2.68□□□□□ -1.98
PRP28P23394 KAR3YPR141C 2190 nt2.68□□□□□ -1.98
PRP28P23394 YKU80YMR106C 1890 nt2.67□□□□□ -1.98
PRP28P23394 tF(GAA)DtF(GAA)D 73 nt2.67□□□□□ -1.98
PRP28P23394 tF(GAA)NtF(GAA)N 73 nt2.67□□□□□ -1.98
PRP28P23394 LSM7YNL147W 348 nt2.67□□□□□ -1.98
PRP28P23394 GIN4YDR507C 3429 nt2.66□□□□□ -1.98
PRP28P23394 YCR018C-AYCR018C-A 255 nt2.66□□□□□ -1.98
PRP28P23394 snR76snR76 109 nt2.66□□□□□ -1.98
PRP28P23394 YNL010WYNL010W 726 nt2.66□□□□□ -1.98
PRP28P23394 RTC6YPL183W-A 282 nt2.66□□□□□ -1.98
PRP28P23394 ACM1YPL267W 630 nt2.66□□□□□ -1.98
PRP28P23394 POL3YDL102W 3294 nt2.66□□□□□ -1.98
PRP28P23394 DNL4YOR005C 2835 nt2.66□□□□□ -1.98
PRP28P23394 SWR1YDR334W 4545 nt2.65□□□□□ -1.98
PRP28P23394 snR80snR80 171 nt2.65□□□□□ -1.99
PRP28P23394 PNC1YGL037C 651 nt2.65□□□□□ -1.99
PRP28P23394 YKL183C-AYKL183C-A 213 nt2.65□□□□□ -1.99
PRP28P23394 YOR225WYOR225W 330 nt2.65□□□□□ -1.99
PRP28P23394 YIL169CYIL169C 2988 nt2.65□□□□□ -1.99
PRP28P23394 ILS1YBL076C 3219 nt2.64□□□□□ -1.99
PRP28P23394 BAS1YKR099W 2436 nt2.64□□□□□ -1.99
PRP28P23394 YIL080WYIL080W 4722 nt2.64□□□□□ -1.99
PRP28P23394 MPH1YIR002C 2982 nt2.64□□□□□ -1.99
PRP28P23394 RRP12YPL012W 3687 nt2.64□□□□□ -1.99
PRP28P23394 FAR11YNL127W 2862 nt2.64□□□□□ -1.99
PRP28P23394 YDL025W-AYDL025W-A 105 nt2.64□□□□□ -1.99
PRP28P23394 YGL014C-AYGL014C-A 162 nt2.64□□□□□ -1.99
PRP28P23394 YGL063C-AYGL063C-A 150 nt2.64□□□□□ -1.99
PRP28P23394 ORC1YML065W 2745 nt2.64□□□□□ -1.99
PRP28P23394 ORC2YBR060C 1863 nt2.64□□□□□ -1.99
PRP28P23394 YGL024WYGL024W 336 nt2.63□□□□□ -1.99
PRP28P23394 YGR069WYGR069W 336 nt2.63□□□□□ -1.99
PRP28P23394 PHS1YJL097W 654 nt2.63□□□□□ -1.99
PRP28P23394 RPS29AYLR388W 171 nt2.63□□□□□ -1.99
PRP28P23394 FPR1YNL135C 345 nt2.63□□□□□ -1.99
PRP28P23394 LCL1YPL056C 306 nt2.63□□□□□ -1.99
PRP28P23394 YDR048CYDR048C 315 nt2.62□□□□□ -1.99
PRP28P23394 APC9YLR102C 798 nt2.62□□□□□ -1.99
PRP28P23394 HTB2YBL002W 396 nt2.62□□□□□ -1.99
PRP28P23394 GRX8YLR364W 330 nt2.62□□□□□ -1.99
PRP28P23394 RPL33AYPL143W 324 nt2.62□□□□□ -1.99
PRP28P23394 YGR067CYGR067C 2415 nt2.62□□□□□ -1.99
PRP28P23394 RGA2YDR379W 3030 nt2.62□□□□□ -1.99
PRP28P23394 OSH6YKR003W 1347 nt2.62□□□□□ -1.99
PRP28P23394 SAK1YER129W 3429 nt2.62□□□□□ -1.99
PRP28P23394 SGM1YJR134C 2124 nt2.62□□□□□ -1.99
PRP28P23394 PSD2YGR170W 3417 nt2.61□□□□□ -1.99
PRP28P23394 HTL1YCR020W-B 237 nt2.61□□□□□ -1.99
PRP28P23394 tM(CAU)Q1tM(CAU)Q1 76 nt2.61□□□□□ -1.99
PRP28P23394 YNL337WYNL337W 255 nt2.61□□□□□ -1.99
PRP28P23394 MF(ALPHA)1YPL187W 498 nt2.61□□□□□ -1.99
PRP28P23394 DIS3YOL021C 3006 nt2.61□□□□□ -1.99
PRP28P23394 AMS1YGL156W 3252 nt2.61□□□□□ -1.99
PRP28P23394 SIR3YLR442C 2937 nt2.61□□□□□ -1.99
PRP28P23394 SDC25YLL016W 3147 nt2.6□□□□□ -1.99
PRP28P23394 NAB3YPL190C 2409 nt2.6□□□□□ -1.99
PRP28P23394 KRE33YNL132W 3171 nt2.6□□□□□ -1.99
PRP28P23394 Q0032Q0032 291 nt2.6□□□□□ -1.99
PRP28P23394 RPL23BYER117W 414 nt2.6□□□□□ -1.99
PRP28P23394 YGL188C-AYGL188C-A 141 nt2.6□□□□□ -1.99
PRP28P23394 YGR265WYGR265W 411 nt2.6□□□□□ -1.99
PRP28P23394 RPS22AYJL190C 393 nt2.6□□□□□ -1.99
PRP28P23394 SMA2YML066C 1110 nt2.6□□□□□ -1.99
PRP28P23394 RPL36BYPL249C-A 303 nt2.6□□□□□ -1.99
PRP28P23394 YPR099CYPR099C 357 nt2.6□□□□□ -1.99
PRP28P23394 YME2YMR302C 2553 nt2.6□□□□□ -1.99
PRP28P23394 LYS9YNR050C 1341 nt2.6□□□□□ -1.99
PRP28P23394 JIP5YPR169W 1479 nt2.59□□□□□ -1.99
PRP28P23394 NCL1YBL024W 2055 nt2.59□□□□□ -1.99
PRP28P23394 UBP11YKR098C 2154 nt2.59□□□□□ -1.99
PRP28P23394 YDR344CYDR344C 444 nt2.59□□□□□ -1.99
PRP28P23394 YHL041WYHL041W 450 nt2.59□□□□□ -1.99
PRP28P23394 YAL042C-AYAL042C-A 378 nt2.59□□□□□ -1.99
PRP28P23394 TRA1YHR099W 11235 nt2.59□□□□□ -1.99
PRP28P23394 MSB2YGR014W 3921 nt2.59□□□□□ -2
PRP28P23394 PFF1YBR074W 2931 nt2.58□□□□□ -2
PRP28P23394 DBP6YNR038W 1890 nt2.58□□□□□ -2
PRP28P23394 SWA2YDR320C 2007 nt2.58□□□□□ -2
PRP28P23394 DOT6YER088C 2013 nt2.58□□□□□ -2
PRP28P23394 YDL062WYDL062W 426 nt2.58□□□□□ -2
PRP28P23394 HYP2YEL034W 474 nt2.58□□□□□ -2
PRP28P23394 ALG13YGL047W 609 nt2.58□□□□□ -2
PRP28P23394 YLR012CYLR012C 300 nt2.58□□□□□ -2
PRP28P23394 RPL36AYMR194W 303 nt2.58□□□□□ -2
PRP28P23394 SAR1YPL218W 573 nt2.58□□□□□ -2
PRP28P23394 YPR089WYPR089W 2667 nt2.58□□□□□ -2
PRP28P23394 NUP120YKL057C 3114 nt2.58□□□□□ -2
PRP28P23394 ESC1YMR219W 4977 nt2.58□□□□□ -2
PRP28P23394 YOR296WYOR296W 3870 nt2.58□□□□□ -2
PRP28P23394 KSP1YHR082C 3090 nt2.57□□□□□ -2
PRP28P23394 PTC5YOR090C 1719 nt2.57□□□□□ -2
PRP28P23394 RBK1YCR036W 1002 nt2.57□□□□□ -2
PRP28P23394 YER079C-AYER079C-A 339 nt2.57□□□□□ -2
PRP28P23394 YGL069CYGL069C 465 nt2.57□□□□□ -2
PRP28P23394 RPS27AYKL156W 249 nt2.57□□□□□ -2
PRP28P23394 BFA1YJR053W 1725 nt2.56□□□□□ -2
PRP28P23394 SGD1YLR336C 2700 nt2.56□□□□□ -2
PRP28P23394 HRD3YLR207W 2502 nt2.56□□□□□ -2
PRP28P23394 YIL174WYIL174W 228 nt2.56□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 62.7 ms