Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 AC027612.3-201ENST00000413684 1047 ntBASIC18.84■□□□□ 0.61
TNFRSF1BP20333 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 AP001160.3-201ENST00000601484 763 ntBASIC18.84■□□□□ 0.61
TNFRSF1BP20333 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF1BP20333 AL158211.5-201ENST00000623583 2518 ntBASIC18.83■□□□□ 0.61
TNFRSF1BP20333 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFRSF1BP20333 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TNFRSF1BP20333 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFRSF1BP20333 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFRSF1BP20333 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFRSF1BP20333 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFRSF1BP20333 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 DUX4L2-201ENST00000561772 1275 ntBASIC18.83■□□□□ 0.6
TNFRSF1BP20333 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 AC005837.3-201ENST00000612163 286 ntBASIC18.83■□□□□ 0.6
TNFRSF1BP20333 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 DUX4L6-201ENST00000626483 1275 ntBASIC18.83■□□□□ 0.6
TNFRSF1BP20333 DUX4L1-201ENST00000627662 1275 ntBASIC18.83■□□□□ 0.6
TNFRSF1BP20333 DUX4L8-201ENST00000629013 1275 ntBASIC18.83■□□□□ 0.6
TNFRSF1BP20333 DUX4L3-201ENST00000630187 1275 ntBASIC18.83■□□□□ 0.6
TNFRSF1BP20333 DUX4L7-201ENST00000630678 1275 ntBASIC18.83■□□□□ 0.6
TNFRSF1BP20333 DUX4L5-201ENST00000630834 1275 ntBASIC18.83■□□□□ 0.6
TNFRSF1BP20333 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF1BP20333 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.82■□□□□ 0.6
TNFRSF1BP20333 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF1BP20333 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 LINC02228-203ENST00000641970 1355 ntBASIC18.81■□□□□ 0.6
TNFRSF1BP20333 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.81■□□□□ 0.6
TNFRSF1BP20333 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms