Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 CSE2YNR010W 450 nt2.53□□□□□ -2
CDC43P18898 VPS35YJL154C 2835 nt2.53□□□□□ -2
CDC43P18898 PHO2YDL106C 1680 nt2.53□□□□□ -2
CDC43P18898 GUP1YGL084C 1683 nt2.53□□□□□ -2
CDC43P18898 STU2YLR045C 2667 nt2.53□□□□□ -2.01
CDC43P18898 MDV1YJL112W 2145 nt2.53□□□□□ -2.01
CDC43P18898 RDS1YCR106W 2499 nt2.52□□□□□ -2.01
CDC43P18898 FLO11YIR019C 4104 nt2.52□□□□□ -2.01
CDC43P18898 YDR426CYDR426C 378 nt2.52□□□□□ -2.01
CDC43P18898 SMD1YGR074W 441 nt2.52□□□□□ -2.01
CDC43P18898 PHD1YKL043W 1101 nt2.52□□□□□ -2.01
CDC43P18898 RPS27AYKL156W 249 nt2.52□□□□□ -2.01
CDC43P18898 HSC82YMR186W 2118 nt2.52□□□□□ -2.01
CDC43P18898 NAB3YPL190C 2409 nt2.52□□□□□ -2.01
CDC43P18898 ITC1YGL133W 3795 nt2.51□□□□□ -2.01
CDC43P18898 PAN3YKL025C 2040 nt2.51□□□□□ -2.01
CDC43P18898 DYN1YKR054C 12279 nt2.51□□□□□ -2.01
CDC43P18898 MRP10YDL045W-A 288 nt2.51□□□□□ -2.01
CDC43P18898 YML007C-AYML007C-A 111 nt2.51□□□□□ -2.01
CDC43P18898 RGM1YMR182C 636 nt2.51□□□□□ -2.01
CDC43P18898 KAP104YBR017C 2757 nt2.51□□□□□ -2.01
CDC43P18898 MMS1YPR164W 4224 nt2.5□□□□□ -2.01
CDC43P18898 LCD1YDR499W 2244 nt2.5□□□□□ -2.01
CDC43P18898 TMN3YER113C 2121 nt2.5□□□□□ -2.01
CDC43P18898 OLI1Q0130 231 nt2.5□□□□□ -2.01
CDC43P18898 YML037CYML037C 1023 nt2.5□□□□□ -2.01
CDC43P18898 DOT6YER088C 2013 nt2.49□□□□□ -2.01
CDC43P18898 FUN30YAL019W 3396 nt2.49□□□□□ -2.01
CDC43P18898 TMA17YDL110C 453 nt2.49□□□□□ -2.01
CDC43P18898 YEL014CYEL014C 306 nt2.49□□□□□ -2.01
CDC43P18898 TRX1YLR043C 312 nt2.49□□□□□ -2.01
CDC43P18898 FPR1YNL135C 345 nt2.49□□□□□ -2.01
CDC43P18898 YOR333CYOR333C 417 nt2.49□□□□□ -2.01
CDC43P18898 EXO84YBR102C 2262 nt2.49□□□□□ -2.01
CDC43P18898 YDR210W-BYDR210W-B 5313 nt2.49□□□□□ -2.01
CDC43P18898 YDR261W-BYDR261W-B 5313 nt2.49□□□□□ -2.01
CDC43P18898 YFL002W-AYFL002W-A 5313 nt2.49□□□□□ -2.01
CDC43P18898 YGR161W-BYGR161W-B 5313 nt2.49□□□□□ -2.01
CDC43P18898 YLR410W-BYLR410W-B 5313 nt2.49□□□□□ -2.01
CDC43P18898 YCL019WYCL019W 5313 nt2.49□□□□□ -2.01
CDC43P18898 FLO1YAR050W 4614 nt2.49□□□□□ -2.01
CDC43P18898 MOT1YPL082C 5604 nt2.48□□□□□ -2.01
CDC43P18898 YDL025W-AYDL025W-A 105 nt2.48□□□□□ -2.01
CDC43P18898 RRT15YLR162W-A 189 nt2.48□□□□□ -2.01
CDC43P18898 YBL083CYBL083C 426 nt2.48□□□□□ -2.01
CDC43P18898 YBR224WYBR224W 516 nt2.48□□□□□ -2.01
CDC43P18898 ESL1YIL151C 3357 nt2.48□□□□□ -2.01
CDC43P18898 YIL080WYIL080W 4722 nt2.48□□□□□ -2.01
CDC43P18898 LOS1YKL205W 3303 nt2.48□□□□□ -2.01
CDC43P18898 PDE2YOR360C 1581 nt2.48□□□□□ -2.01
CDC43P18898 PRP8YHR165C 7242 nt2.48□□□□□ -2.01
CDC43P18898 ARO80YDR421W 2853 nt2.47□□□□□ -2.01
CDC43P18898 YHR080CYHR080C 4038 nt2.47□□□□□ -2.01
CDC43P18898 UBP14YBR058C 2346 nt2.47□□□□□ -2.01
CDC43P18898 snR74snR74 88 nt2.47□□□□□ -2.01
CDC43P18898 YGR164WYGR164W 336 nt2.47□□□□□ -2.01
CDC43P18898 snR46snR46 197 nt2.47□□□□□ -2.01
CDC43P18898 VAS1YGR094W 3315 nt2.47□□□□□ -2.01
CDC43P18898 DFG16YOR030W 1860 nt2.47□□□□□ -2.01
CDC43P18898 NOP53YPL146C 1368 nt2.47□□□□□ -2.01
CDC43P18898 FRE2YKL220C 2136 nt2.47□□□□□ -2.01
CDC43P18898 CDC27YBL084C 2277 nt2.47□□□□□ -2.01
CDC43P18898 DBP7YKR024C 2229 nt2.46□□□□□ -2.01
CDC43P18898 MPT5YGL178W 2580 nt2.46□□□□□ -2.02
CDC43P18898 ERP6YGL002W 651 nt2.46□□□□□ -2.02
CDC43P18898 YGL014C-AYGL014C-A 162 nt2.46□□□□□ -2.02
CDC43P18898 YGL217CYGL217C 342 nt2.46□□□□□ -2.02
CDC43P18898 CIN8YEL061C 3003 nt2.46□□□□□ -2.02
CDC43P18898 SNU114YKL173W 3027 nt2.46□□□□□ -2.02
CDC43P18898 TOF2YKR010C 2316 nt2.46□□□□□ -2.02
CDC43P18898 POM152YMR129W 4014 nt2.45□□□□□ -2.02
CDC43P18898 NTO1YPR031W 2247 nt2.45□□□□□ -2.02
CDC43P18898 SGD1YLR336C 2700 nt2.45□□□□□ -2.02
CDC43P18898 YER189WYER189W 369 nt2.45□□□□□ -2.02
CDC43P18898 COX19YLL018C-A 297 nt2.45□□□□□ -2.02
CDC43P18898 YOR376WYOR376W 369 nt2.45□□□□□ -2.02
CDC43P18898 YPR002C-AYPR002C-A 198 nt2.45□□□□□ -2.02
CDC43P18898 snR48snR48 113 nt2.45□□□□□ -2.02
CDC43P18898 VPS54YDR027C 2670 nt2.45□□□□□ -2.02
CDC43P18898 RSN1YMR266W 2862 nt2.45□□□□□ -2.02
CDC43P18898 SEC7YDR170C 6030 nt2.45□□□□□ -2.02
CDC43P18898 HRD3YLR207W 2502 nt2.44□□□□□ -2.02
CDC43P18898 DUF1YOL087C 3351 nt2.44□□□□□ -2.02
CDC43P18898 YDR286CYDR286C 345 nt2.44□□□□□ -2.02
CDC43P18898 PLC1YPL268W 2610 nt2.44□□□□□ -2.02
CDC43P18898 MTC3YGL226W 372 nt2.43□□□□□ -2.02
CDC43P18898 COF1YLL050C 432 nt2.43□□□□□ -2.02
CDC43P18898 APC9YLR102C 798 nt2.43□□□□□ -2.02
CDC43P18898 YPR092WYPR092W 306 nt2.43□□□□□ -2.02
CDC43P18898 SIN3YOL004W 4611 nt2.43□□□□□ -2.02
CDC43P18898 TRM2YKR056W 1920 nt2.42□□□□□ -2.02
CDC43P18898 ALK2YBL009W 2031 nt2.42□□□□□ -2.02
CDC43P18898 ORC1YML065W 2745 nt2.42□□□□□ -2.02
CDC43P18898 PFF1YBR074W 2931 nt2.42□□□□□ -2.02
CDC43P18898 VPS53YJL029C 2469 nt2.42□□□□□ -2.02
CDC43P18898 NOP10YHR072W-A 177 nt2.42□□□□□ -2.02
CDC43P18898 YIR030W-AYIR030W-A 384 nt2.42□□□□□ -2.02
CDC43P18898 TMA19YKL056C 504 nt2.42□□□□□ -2.02
CDC43P18898 YBR182C-AYBR182C-A 195 nt2.42□□□□□ -2.02
CDC43P18898 COP1YDL145C 3606 nt2.42□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 172.9 ms