Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
VCLP18206 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VCLP18206 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
VCLP18206 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.36■□□□□ 0.85
VCLP18206 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.36■□□□□ 0.85
VCLP18206 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
VCLP18206 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.36■□□□□ 0.85
VCLP18206 AC091799.1-201ENST00000422823 811 ntBASIC20.36■□□□□ 0.85
VCLP18206 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 AF201337.1-201ENST00000520239 748 ntBASIC20.36■□□□□ 0.85
VCLP18206 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.36■□□□□ 0.85
VCLP18206 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
VCLP18206 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
VCLP18206 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.36■□□□□ 0.85
VCLP18206 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.36■□□□□ 0.85
VCLP18206 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCLP18206 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCLP18206 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCLP18206 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCLP18206 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCLP18206 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
VCLP18206 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VCLP18206 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
VCLP18206 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.35■□□□□ 0.85
VCLP18206 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.35■□□□□ 0.85
VCLP18206 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.35■□□□□ 0.85
VCLP18206 AL050303.2-201ENST00000619798 666 ntBASIC20.35■□□□□ 0.85
VCLP18206 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCLP18206 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
VCLP18206 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.35■□□□□ 0.85
VCLP18206 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.35■□□□□ 0.85
VCLP18206 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCLP18206 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
VCLP18206 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
VCLP18206 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
VCLP18206 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.34■□□□□ 0.85
VCLP18206 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VCLP18206 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VCLP18206 SLC29A4P1-201ENST00000398760 971 ntBASIC20.34■□□□□ 0.85
VCLP18206 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VCLP18206 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.34■□□□□ 0.85
VCLP18206 AC083906.2-201ENST00000511578 360 ntBASIC20.34■□□□□ 0.85
VCLP18206 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.34■□□□□ 0.85
VCLP18206 AC105036.2-201ENST00000569468 176 ntBASIC20.34■□□□□ 0.85
VCLP18206 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.34■□□□□ 0.85
VCLP18206 AL109923.1-201ENST00000618799 583 ntBASIC20.34■□□□□ 0.85
VCLP18206 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.34■□□□□ 0.85
VCLP18206 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.34■□□□□ 0.85
VCLP18206 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VCLP18206 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VCLP18206 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.34■□□□□ 0.85
VCLP18206 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
VCLP18206 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
VCLP18206 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
VCLP18206 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VCLP18206 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.33■□□□□ 0.85
VCLP18206 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.33■□□□□ 0.85
VCLP18206 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
VCLP18206 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VCLP18206 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VCLP18206 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VCLP18206 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.33■□□□□ 0.85
VCLP18206 HLA-L-209ENST00000420110 1011 ntBASIC20.33■□□□□ 0.85
VCLP18206 AC007322.3-201ENST00000426526 701 ntBASIC20.33■□□□□ 0.85
VCLP18206 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.33■□□□□ 0.85
VCLP18206 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.33■□□□□ 0.85
VCLP18206 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VCLP18206 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.33■□□□□ 0.85
VCLP18206 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.33■□□□□ 0.85
VCLP18206 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
VCLP18206 FAM21FP-204ENST00000608637 956 ntBASIC20.33■□□□□ 0.85
VCLP18206 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VCLP18206 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.33■□□□□ 0.84
VCLP18206 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
VCLP18206 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VCLP18206 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VCLP18206 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VCLP18206 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
VCLP18206 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
VCLP18206 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.33■□□□□ 0.84
VCLP18206 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VCLP18206 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VCLP18206 FEM1AP1-201ENST00000431297 1995 ntBASIC20.32■□□□□ 0.84
VCLP18206 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VCLP18206 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VCLP18206 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VCLP18206 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VCLP18206 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms