Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
ERCC2P18074 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC2P18074 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC2P18074 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC2P18074 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.93■□□□□ 0.94
ERCC2P18074 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.93■□□□□ 0.94
ERCC2P18074 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
ERCC2P18074 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.93■□□□□ 0.94
ERCC2P18074 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC2P18074 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.93■□□□□ 0.94
ERCC2P18074 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ERCC2P18074 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.93■□□□□ 0.94
ERCC2P18074 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC2P18074 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC2P18074 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC2P18074 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC2P18074 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC2P18074 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.92■□□□□ 0.94
ERCC2P18074 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC2P18074 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.92■□□□□ 0.94
ERCC2P18074 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC2P18074 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC2P18074 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC2P18074 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC2P18074 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.92■□□□□ 0.94
ERCC2P18074 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC2P18074 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.92■□□□□ 0.94
ERCC2P18074 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.92■□□□□ 0.94
ERCC2P18074 AL121832.2-201ENST00000610979 668 ntBASIC20.92■□□□□ 0.94
ERCC2P18074 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ERCC2P18074 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.92■□□□□ 0.94
ERCC2P18074 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC2P18074 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.92■□□□□ 0.94
ERCC2P18074 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.92■□□□□ 0.94
ERCC2P18074 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
ERCC2P18074 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.92■□□□□ 0.94
ERCC2P18074 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.92■□□□□ 0.94
ERCC2P18074 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.92■□□□□ 0.94
ERCC2P18074 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.92■□□□□ 0.94
ERCC2P18074 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC2P18074 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC2P18074 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC2P18074 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC2P18074 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ERCC2P18074 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.91■□□□□ 0.94
ERCC2P18074 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC2P18074 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC2P18074 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
ERCC2P18074 KRT17P1-201ENST00000399211 1546 ntBASIC20.91■□□□□ 0.94
ERCC2P18074 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC2P18074 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC2P18074 MKRN4P-201ENST00000444706 1521 ntBASIC20.91■□□□□ 0.94
ERCC2P18074 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.91■□□□□ 0.94
ERCC2P18074 AC083906.2-201ENST00000511578 360 ntBASIC20.91■□□□□ 0.94
ERCC2P18074 AC090192.1-201ENST00000517740 490 ntBASIC20.91■□□□□ 0.94
ERCC2P18074 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC2P18074 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.91■□□□□ 0.94
ERCC2P18074 AC105020.6-201ENST00000621523 1217 ntBASIC20.91■□□□□ 0.94
ERCC2P18074 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.91■□□□□ 0.94
ERCC2P18074 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.91■□□□□ 0.94
ERCC2P18074 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.91■□□□□ 0.94
ERCC2P18074 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.91■□□□□ 0.94
ERCC2P18074 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC2P18074 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC2P18074 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC2P18074 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC2P18074 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ERCC2P18074 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC2P18074 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC2P18074 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.9■□□□□ 0.94
ERCC2P18074 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC2P18074 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.9■□□□□ 0.94
ERCC2P18074 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.9■□□□□ 0.94
ERCC2P18074 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.9■□□□□ 0.94
ERCC2P18074 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.9■□□□□ 0.94
ERCC2P18074 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC2P18074 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.9■□□□□ 0.94
ERCC2P18074 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC2P18074 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC2P18074 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
ERCC2P18074 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC2P18074 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC2P18074 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERCC2P18074 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ERCC2P18074 AL512408.1-201ENST00000569378 2000 ntBASIC20.89■□□□□ 0.93
ERCC2P18074 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC2P18074 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC2P18074 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC2P18074 NCF1B-203ENST00000435988 1254 ntBASIC20.89■□□□□ 0.93
ERCC2P18074 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.89■□□□□ 0.93
ERCC2P18074 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.89■□□□□ 0.93
ERCC2P18074 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.89■□□□□ 0.93
ERCC2P18074 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.89■□□□□ 0.93
ERCC2P18074 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.89■□□□□ 0.93
ERCC2P18074 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC2P18074 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC2P18074 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.88■□□□□ 0.93
ERCC2P18074 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC2P18074 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
ERCC2P18074 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms