Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP3CBP16298 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP3CBP16298 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.15■□□□□ 0.5
PPP3CBP16298 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP3CBP16298 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.14■□□□□ 0.5
PPP3CBP16298 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PPP3CBP16298 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PPP3CBP16298 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PPP3CBP16298 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PPP3CBP16298 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PPP3CBP16298 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PPP3CBP16298 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PPP3CBP16298 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.14■□□□□ 0.49
PPP3CBP16298 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.14■□□□□ 0.49
PPP3CBP16298 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.14■□□□□ 0.49
PPP3CBP16298 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PPP3CBP16298 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PPP3CBP16298 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PPP3CBP16298 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.14■□□□□ 0.49
PPP3CBP16298 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.14■□□□□ 0.49
PPP3CBP16298 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.14■□□□□ 0.49
PPP3CBP16298 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.14■□□□□ 0.49
PPP3CBP16298 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.14■□□□□ 0.49
PPP3CBP16298 AC098934.4-201ENST00000564127 592 ntBASIC18.14■□□□□ 0.49
PPP3CBP16298 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.14■□□□□ 0.49
PPP3CBP16298 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.14■□□□□ 0.49
PPP3CBP16298 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PPP3CBP16298 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PPP3CBP16298 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.14■□□□□ 0.49
PPP3CBP16298 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PPP3CBP16298 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PPP3CBP16298 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PPP3CBP16298 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PPP3CBP16298 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PPP3CBP16298 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.13■□□□□ 0.49
PPP3CBP16298 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.13■□□□□ 0.49
PPP3CBP16298 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PPP3CBP16298 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 LSM12P1-201ENST00000411836 588 ntBASIC18.13■□□□□ 0.49
PPP3CBP16298 TSPY20P-201ENST00000450910 630 ntBASIC18.13■□□□□ 0.49
PPP3CBP16298 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.13■□□□□ 0.49
PPP3CBP16298 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.13■□□□□ 0.49
PPP3CBP16298 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PPP3CBP16298 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PPP3CBP16298 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.13■□□□□ 0.49
PPP3CBP16298 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP3CBP16298 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.12■□□□□ 0.49
PPP3CBP16298 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 AC026471.6-201ENST00000622954 1905 ntBASIC18.12■□□□□ 0.49
PPP3CBP16298 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.12■□□□□ 0.49
PPP3CBP16298 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.12■□□□□ 0.49
PPP3CBP16298 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.12■□□□□ 0.49
PPP3CBP16298 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PPP3CBP16298 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.12■□□□□ 0.49
PPP3CBP16298 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.12■□□□□ 0.49
PPP3CBP16298 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.12■□□□□ 0.49
PPP3CBP16298 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.12■□□□□ 0.49
PPP3CBP16298 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP3CBP16298 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PPP3CBP16298 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.11■□□□□ 0.49
PPP3CBP16298 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.11■□□□□ 0.49
PPP3CBP16298 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PPP3CBP16298 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.11■□□□□ 0.49
PPP3CBP16298 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.11■□□□□ 0.49
PPP3CBP16298 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PPP3CBP16298 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms