Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL4P13236 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.27■□□□□ 0.68
CCL4P13236 KRT17P2-201ENST00000300992 1314 ntBASIC19.27■□□□□ 0.68
CCL4P13236 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCL4P13236 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCL4P13236 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.27■□□□□ 0.68
CCL4P13236 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.27■□□□□ 0.68
CCL4P13236 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL4P13236 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL4P13236 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL4P13236 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL4P13236 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL4P13236 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.27■□□□□ 0.68
CCL4P13236 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL4P13236 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCL4P13236 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCL4P13236 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL4P13236 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCL4P13236 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.27■□□□□ 0.67
CCL4P13236 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.27■□□□□ 0.67
CCL4P13236 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCL4P13236 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.26■□□□□ 0.67
CCL4P13236 AC244015.2-201ENST00000616358 1861 ntBASIC19.26■□□□□ 0.67
CCL4P13236 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL4P13236 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL4P13236 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL4P13236 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL4P13236 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCL4P13236 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL4P13236 TSPY15P-201ENST00000457163 923 ntBASIC19.26■□□□□ 0.67
CCL4P13236 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.26■□□□□ 0.67
CCL4P13236 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.26■□□□□ 0.67
CCL4P13236 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCL4P13236 AP001412.1-201ENST00000608405 714 ntBASIC19.26■□□□□ 0.67
CCL4P13236 AC113410.3-201ENST00000623366 203 ntBASIC19.26■□□□□ 0.67
CCL4P13236 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.26■□□□□ 0.67
CCL4P13236 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.26■□□□□ 0.67
CCL4P13236 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.26■□□□□ 0.67
CCL4P13236 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCL4P13236 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL4P13236 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.25■□□□□ 0.67
CCL4P13236 AL135905.2-201ENST00000584934 1404 ntBASIC19.25■□□□□ 0.67
CCL4P13236 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL4P13236 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL4P13236 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL4P13236 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL4P13236 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.25■□□□□ 0.67
CCL4P13236 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.25■□□□□ 0.67
CCL4P13236 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCL4P13236 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.25■□□□□ 0.67
CCL4P13236 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCL4P13236 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCL4P13236 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.25■□□□□ 0.67
CCL4P13236 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL4P13236 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCL4P13236 AC027702.1-201ENST00000563810 1770 ntBASIC19.24■□□□□ 0.67
CCL4P13236 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL4P13236 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL4P13236 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL4P13236 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCL4P13236 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL4P13236 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCL4P13236 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.24■□□□□ 0.67
CCL4P13236 PRKY-204ENST00000533551 1019 ntBASIC19.24■□□□□ 0.67
CCL4P13236 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.24■□□□□ 0.67
CCL4P13236 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCL4P13236 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL4P13236 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCL4P13236 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL4P13236 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL4P13236 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL4P13236 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL4P13236 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CCL4P13236 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.23■□□□□ 0.67
CCL4P13236 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCL4P13236 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.23■□□□□ 0.67
CCL4P13236 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.23■□□□□ 0.67
CCL4P13236 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL4P13236 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.23■□□□□ 0.67
CCL4P13236 RARRES2P10-201ENST00000564312 460 ntBASIC19.23■□□□□ 0.67
CCL4P13236 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms