Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 POM121L13P-201ENST00000422362 380 ntBASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 RPPH1-201ENST00000516869 333 ntBASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB40ALP0C0E4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 AC069544.1-201ENST00000609399 999 ntBASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RAB40ALP0C0E4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 AC008550.1-201ENST00000511500 884 ntBASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 C1QBPP2-201ENST00000528754 825 ntBASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 FAM197Y4-202ENST00000622692 608 ntBASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40ALP0C0E4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
RAB40ALP0C0E4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.14■□□□□ 0.66
RAB40ALP0C0E4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
RAB40ALP0C0E4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB40ALP0C0E4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB40ALP0C0E4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB40ALP0C0E4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RAB40ALP0C0E4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 AC005829.2-201ENST00000571422 1056 ntBASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 AC244015.2-201ENST00000616358 1861 ntBASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB40ALP0C0E4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 AC011484.1-201ENST00000377652 1995 ntBASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms