Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.64■□□□□ 0.9
HLA-DQB2P05538 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
HLA-DQB2P05538 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.64■□□□□ 0.9
HLA-DQB2P05538 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DQB2P05538 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.64■□□□□ 0.9
HLA-DQB2P05538 KRT17P1-201ENST00000399211 1546 ntBASIC20.64■□□□□ 0.9
HLA-DQB2P05538 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 AC090192.1-201ENST00000517740 490 ntBASIC20.64■□□□□ 0.89
HLA-DQB2P05538 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.64■□□□□ 0.89
HLA-DQB2P05538 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 AL512408.1-201ENST00000569378 2000 ntBASIC20.64■□□□□ 0.89
HLA-DQB2P05538 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DQB2P05538 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 MKRN4P-201ENST00000444706 1521 ntBASIC20.63■□□□□ 0.89
HLA-DQB2P05538 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 AL121832.2-201ENST00000610979 668 ntBASIC20.63■□□□□ 0.89
HLA-DQB2P05538 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQB2P05538 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.62■□□□□ 0.89
HLA-DQB2P05538 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 AC083906.2-201ENST00000511578 360 ntBASIC20.62■□□□□ 0.89
HLA-DQB2P05538 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DQB2P05538 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 NCF1B-203ENST00000435988 1254 ntBASIC20.61■□□□□ 0.89
HLA-DQB2P05538 GUSBP6-202ENST00000438529 1198 ntBASIC20.61■□□□□ 0.89
HLA-DQB2P05538 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB2P05538 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.6■□□□□ 0.89
HLA-DQB2P05538 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB2P05538 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms