Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CHGBP05060 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.5■■□□□ 1.51
CHGBP05060 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.5■■□□□ 1.51
CHGBP05060 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.5■■□□□ 1.51
CHGBP05060 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHGBP05060 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.5■■□□□ 1.51
CHGBP05060 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHGBP05060 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHGBP05060 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHGBP05060 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CHGBP05060 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CHGBP05060 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHGBP05060 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.49■■□□□ 1.51
CHGBP05060 AC097658.1-201ENST00000475555 843 ntBASIC24.49■■□□□ 1.51
CHGBP05060 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC24.49■■□□□ 1.51
CHGBP05060 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.49■■□□□ 1.51
CHGBP05060 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHGBP05060 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHGBP05060 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHGBP05060 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CHGBP05060 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHGBP05060 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHGBP05060 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CHGBP05060 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.48■■□□□ 1.51
CHGBP05060 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.48■■□□□ 1.51
CHGBP05060 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.48■■□□□ 1.51
CHGBP05060 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHGBP05060 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.48■■□□□ 1.51
CHGBP05060 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CHGBP05060 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CHGBP05060 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CHGBP05060 C2orf69P4-201ENST00000565394 541 ntBASIC24.48■■□□□ 1.51
CHGBP05060 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.48■■□□□ 1.51
CHGBP05060 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CHGBP05060 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
CHGBP05060 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CHGBP05060 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHGBP05060 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.47■■□□□ 1.51
CHGBP05060 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.47■■□□□ 1.51
CHGBP05060 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
CHGBP05060 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CHGBP05060 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHGBP05060 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHGBP05060 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHGBP05060 RNA5SP413-201ENST00000516373 109 ntBASIC24.47■■□□□ 1.51
CHGBP05060 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.47■■□□□ 1.51
CHGBP05060 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.47■■□□□ 1.51
CHGBP05060 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHGBP05060 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CHGBP05060 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.46■■□□□ 1.51
CHGBP05060 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
CHGBP05060 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
CHGBP05060 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHGBP05060 FEM1AP1-201ENST00000431297 1995 ntBASIC24.46■■□□□ 1.51
CHGBP05060 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHGBP05060 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.46■■□□□ 1.51
CHGBP05060 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.46■■□□□ 1.51
CHGBP05060 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHGBP05060 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.46■■□□□ 1.51
CHGBP05060 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHGBP05060 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CHGBP05060 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
CHGBP05060 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHGBP05060 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHGBP05060 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CHGBP05060 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CHGBP05060 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.45■■□□□ 1.51
CHGBP05060 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CHGBP05060 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.45■■□□□ 1.5
CHGBP05060 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC24.45■■□□□ 1.5
CHGBP05060 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.45■■□□□ 1.5
CHGBP05060 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.45■■□□□ 1.5
CHGBP05060 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHGBP05060 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.45■■□□□ 1.5
CHGBP05060 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.45■■□□□ 1.5
CHGBP05060 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHGBP05060 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.45■■□□□ 1.5
CHGBP05060 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC24.45■■□□□ 1.5
CHGBP05060 CD99P1-205ENST00000527459 561 ntBASIC24.45■■□□□ 1.5
CHGBP05060 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.45■■□□□ 1.5
CHGBP05060 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHGBP05060 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHGBP05060 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.45■■□□□ 1.5
CHGBP05060 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHGBP05060 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHGBP05060 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.44■■□□□ 1.5
CHGBP05060 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.44■■□□□ 1.5
CHGBP05060 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHGBP05060 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms