Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPNS1P04632 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPNS1P04632 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CAPNS1P04632 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CAPNS1P04632 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.18■□□□□ 0.82
CAPNS1P04632 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.18■□□□□ 0.82
CAPNS1P04632 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CAPNS1P04632 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.18■□□□□ 0.82
CAPNS1P04632 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.18■□□□□ 0.82
CAPNS1P04632 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.18■□□□□ 0.82
CAPNS1P04632 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CAPNS1P04632 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPNS1P04632 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.18■□□□□ 0.82
CAPNS1P04632 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.18■□□□□ 0.82
CAPNS1P04632 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPNS1P04632 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPNS1P04632 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.17■□□□□ 0.82
CAPNS1P04632 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CAPNS1P04632 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPNS1P04632 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPNS1P04632 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CAPNS1P04632 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPNS1P04632 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPNS1P04632 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPNS1P04632 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPNS1P04632 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.17■□□□□ 0.82
CAPNS1P04632 BX088651.1-201ENST00000540551 451 ntBASIC20.17■□□□□ 0.82
CAPNS1P04632 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.17■□□□□ 0.82
CAPNS1P04632 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.17■□□□□ 0.82
CAPNS1P04632 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPNS1P04632 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CAPNS1P04632 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.17■□□□□ 0.82
CAPNS1P04632 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CAPNS1P04632 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPNS1P04632 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPNS1P04632 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPNS1P04632 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CAPNS1P04632 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPNS1P04632 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.16■□□□□ 0.82
CAPNS1P04632 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPNS1P04632 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.16■□□□□ 0.82
CAPNS1P04632 AL162412.1-201ENST00000567129 965 ntBASIC20.16■□□□□ 0.82
CAPNS1P04632 CYP2T3P-201ENST00000601990 817 ntBASIC20.16■□□□□ 0.82
CAPNS1P04632 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPNS1P04632 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPNS1P04632 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.16■□□□□ 0.82
CAPNS1P04632 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPNS1P04632 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.15■□□□□ 0.82
CAPNS1P04632 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPNS1P04632 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CAPNS1P04632 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CAPNS1P04632 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.15■□□□□ 0.82
CAPNS1P04632 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPNS1P04632 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.15■□□□□ 0.82
CAPNS1P04632 EEF1DP3-203ENST00000566025 782 ntBASIC20.15■□□□□ 0.82
CAPNS1P04632 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPNS1P04632 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPNS1P04632 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CAPNS1P04632 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CAPNS1P04632 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.14■□□□□ 0.82
CAPNS1P04632 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.14■□□□□ 0.81
CAPNS1P04632 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPNS1P04632 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CAPNS1P04632 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CAPNS1P04632 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms