Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
MT-ND3P03897 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MT-ND3P03897 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MT-ND3P03897 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.64■□□□□ 0.89
MT-ND3P03897 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-ND3P03897 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MT-ND3P03897 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-ND3P03897 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.64■□□□□ 0.89
MT-ND3P03897 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-ND3P03897 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MT-ND3P03897 AC016769.1-201ENST00000409132 1010 ntBASIC20.64■□□□□ 0.89
MT-ND3P03897 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.64■□□□□ 0.89
MT-ND3P03897 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MT-ND3P03897 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MT-ND3P03897 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.64■□□□□ 0.89
MT-ND3P03897 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MT-ND3P03897 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.63■□□□□ 0.89
MT-ND3P03897 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.63■□□□□ 0.89
MT-ND3P03897 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.63■□□□□ 0.89
MT-ND3P03897 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.63■□□□□ 0.89
MT-ND3P03897 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.63■□□□□ 0.89
MT-ND3P03897 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.63■□□□□ 0.89
MT-ND3P03897 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND3P03897 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.63■□□□□ 0.89
MT-ND3P03897 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND3P03897 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.62■□□□□ 0.89
MT-ND3P03897 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.62■□□□□ 0.89
MT-ND3P03897 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND3P03897 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.62■□□□□ 0.89
MT-ND3P03897 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND3P03897 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND3P03897 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.62■□□□□ 0.89
MT-ND3P03897 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND3P03897 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.62■□□□□ 0.89
MT-ND3P03897 AC137761.2-201ENST00000561729 223 ntBASIC20.62■□□□□ 0.89
MT-ND3P03897 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.62■□□□□ 0.89
MT-ND3P03897 AC145350.3-201ENST00000569033 163 ntBASIC20.62■□□□□ 0.89
MT-ND3P03897 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.62■□□□□ 0.89
MT-ND3P03897 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND3P03897 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
MT-ND3P03897 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND3P03897 AP004607.4-201ENST00000530158 1459 ntBASIC20.62■□□□□ 0.89
MT-ND3P03897 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND3P03897 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
MT-ND3P03897 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.61■□□□□ 0.89
MT-ND3P03897 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 KRT19P1-201ENST00000405746 1186 ntBASIC20.61■□□□□ 0.89
MT-ND3P03897 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.61■□□□□ 0.89
MT-ND3P03897 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.61■□□□□ 0.89
MT-ND3P03897 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.61■□□□□ 0.89
MT-ND3P03897 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
MT-ND3P03897 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MT-ND3P03897 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND3P03897 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND3P03897 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.6■□□□□ 0.89
MT-ND3P03897 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND3P03897 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.6■□□□□ 0.89
MT-ND3P03897 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.6■□□□□ 0.89
MT-ND3P03897 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND3P03897 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.6■□□□□ 0.89
MT-ND3P03897 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND3P03897 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.6■□□□□ 0.89
MT-ND3P03897 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.6■□□□□ 0.89
MT-ND3P03897 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.6■□□□□ 0.89
MT-ND3P03897 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.6■□□□□ 0.89
MT-ND3P03897 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND3P03897 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND3P03897 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.6■□□□□ 0.89
MT-ND3P03897 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND3P03897 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.6■□□□□ 0.89
MT-ND3P03897 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND3P03897 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.59■□□□□ 0.89
MT-ND3P03897 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND3P03897 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.59■□□□□ 0.89
MT-ND3P03897 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND3P03897 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND3P03897 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms