Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC23.39■■□□□ 1.33
ALDH1A1P00352 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.39■■□□□ 1.33
ALDH1A1P00352 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.39■■□□□ 1.33
ALDH1A1P00352 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.39■■□□□ 1.33
ALDH1A1P00352 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.39■■□□□ 1.33
ALDH1A1P00352 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC23.39■■□□□ 1.33
ALDH1A1P00352 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
ALDH1A1P00352 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.33
ALDH1A1P00352 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
ALDH1A1P00352 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
ALDH1A1P00352 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ALDH1A1P00352 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.38■■□□□ 1.33
ALDH1A1P00352 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ALDH1A1P00352 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ALDH1A1P00352 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.38■■□□□ 1.33
ALDH1A1P00352 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ALDH1A1P00352 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
ALDH1A1P00352 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.38■■□□□ 1.33
ALDH1A1P00352 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.38■■□□□ 1.33
ALDH1A1P00352 ATP5G1P1-201ENST00000448724 379 ntBASIC23.38■■□□□ 1.33
ALDH1A1P00352 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
ALDH1A1P00352 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
ALDH1A1P00352 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ALDH1A1P00352 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ALDH1A1P00352 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ALDH1A1P00352 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ALDH1A1P00352 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
ALDH1A1P00352 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
ALDH1A1P00352 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.37■■□□□ 1.33
ALDH1A1P00352 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.37■■□□□ 1.33
ALDH1A1P00352 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ALDH1A1P00352 UPK3BP1-201ENST00000428678 509 ntBASIC23.37■■□□□ 1.33
ALDH1A1P00352 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC23.37■■□□□ 1.33
ALDH1A1P00352 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
ALDH1A1P00352 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.37■■□□□ 1.33
ALDH1A1P00352 LINC01238-205ENST00000567549 1107 ntBASIC23.37■■□□□ 1.33
ALDH1A1P00352 CR392000.1-201ENST00000624770 1228 ntBASIC23.37■■□□□ 1.33
ALDH1A1P00352 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.36■■□□□ 1.33
ALDH1A1P00352 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
ALDH1A1P00352 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
ALDH1A1P00352 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ALDH1A1P00352 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
ALDH1A1P00352 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ALDH1A1P00352 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ALDH1A1P00352 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ALDH1A1P00352 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ALDH1A1P00352 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ALDH1A1P00352 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ALDH1A1P00352 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ALDH1A1P00352 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.36■■□□□ 1.33
ALDH1A1P00352 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
ALDH1A1P00352 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.36■■□□□ 1.33
ALDH1A1P00352 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.36■■□□□ 1.33
ALDH1A1P00352 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.36■■□□□ 1.33
ALDH1A1P00352 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ALDH1A1P00352 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ALDH1A1P00352 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
ALDH1A1P00352 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ALDH1A1P00352 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.35■■□□□ 1.33
ALDH1A1P00352 KRT16P1-201ENST00000399124 1418 ntBASIC23.35■■□□□ 1.33
ALDH1A1P00352 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ALDH1A1P00352 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ALDH1A1P00352 NIFKP9-201ENST00000419265 221 ntBASIC23.35■■□□□ 1.33
ALDH1A1P00352 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ALDH1A1P00352 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ALDH1A1P00352 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.35■■□□□ 1.33
ALDH1A1P00352 AC010203.1-204ENST00000548782 407 ntBASIC23.35■■□□□ 1.33
ALDH1A1P00352 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
ALDH1A1P00352 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ALDH1A1P00352 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ALDH1A1P00352 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.35■■□□□ 1.33
ALDH1A1P00352 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.35■■□□□ 1.33
ALDH1A1P00352 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.34■■□□□ 1.33
ALDH1A1P00352 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ALDH1A1P00352 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.34■■□□□ 1.33
ALDH1A1P00352 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.34■■□□□ 1.33
ALDH1A1P00352 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.34■■□□□ 1.33
ALDH1A1P00352 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC23.34■■□□□ 1.33
ALDH1A1P00352 AC006011.2-201ENST00000621313 1158 ntBASIC23.34■■□□□ 1.33
ALDH1A1P00352 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ALDH1A1P00352 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.33■■□□□ 1.33
ALDH1A1P00352 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
ALDH1A1P00352 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.33■■□□□ 1.33
ALDH1A1P00352 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
ALDH1A1P00352 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
ALDH1A1P00352 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ALDH1A1P00352 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ALDH1A1P00352 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ALDH1A1P00352 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
ALDH1A1P00352 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ALDH1A1P00352 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.33■■□□□ 1.33
ALDH1A1P00352 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ALDH1A1P00352 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.33■■□□□ 1.33
ALDH1A1P00352 C2orf69P3-201ENST00000565542 1120 ntBASIC23.33■■□□□ 1.33
ALDH1A1P00352 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.33■■□□□ 1.33
ALDH1A1P00352 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.33■■□□□ 1.33
ALDH1A1P00352 AC124283.5-201ENST00000624661 1809 ntBASIC23.33■■□□□ 1.32
ALDH1A1P00352 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
ALDH1A1P00352 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.32■■□□□ 1.32
ALDH1A1P00352 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms