Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN1O95832 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 KRASP1-201ENST00000407852 552 ntBASIC18.15■□□□□ 0.5
CLDN1O95832 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN1O95832 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CLDN1O95832 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN1O95832 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN1O95832 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN1O95832 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLDN1O95832 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN1O95832 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN1O95832 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLDN1O95832 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CLDN1O95832 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CLDN1O95832 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN1O95832 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLDN1O95832 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.14■□□□□ 0.49
CLDN1O95832 RARRES2P10-201ENST00000564312 460 ntBASIC18.14■□□□□ 0.49
CLDN1O95832 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN1O95832 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.14■□□□□ 0.49
CLDN1O95832 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN1O95832 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 MMP23A-201ENST00000234610 1017 ntBASIC18.13■□□□□ 0.49
CLDN1O95832 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.13■□□□□ 0.49
CLDN1O95832 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN1O95832 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN1O95832 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.13■□□□□ 0.49
CLDN1O95832 AC026471.5-201ENST00000615068 467 ntBASIC18.13■□□□□ 0.49
CLDN1O95832 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN1O95832 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN1O95832 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN1O95832 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN1O95832 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN1O95832 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN1O95832 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN1O95832 AC137767.1-201ENST00000602918 1920 ntBASIC18.12■□□□□ 0.49
CLDN1O95832 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN1O95832 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN1O95832 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN1O95832 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN1O95832 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN1O95832 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN1O95832 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN1O95832 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN1O95832 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN1O95832 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN1O95832 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN1O95832 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN1O95832 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN1O95832 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLDN1O95832 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN1O95832 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN1O95832 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN1O95832 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN1O95832 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN1O95832 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CLDN1O95832 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CLDN1O95832 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
CLDN1O95832 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN1O95832 AC245052.3-201ENST00000450182 901 ntBASIC18.11■□□□□ 0.49
CLDN1O95832 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN1O95832 AP003071.4-201ENST00000562276 1284 ntBASIC18.11■□□□□ 0.49
CLDN1O95832 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.11■□□□□ 0.49
CLDN1O95832 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms