Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PRAMEF1O95521 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF1O95521 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF1O95521 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PRAMEF1O95521 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF1O95521 TSPY6P-201ENST00000448518 926 ntBASIC20.23■□□□□ 0.83
PRAMEF1O95521 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PRAMEF1O95521 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.23■□□□□ 0.83
PRAMEF1O95521 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF1O95521 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.23■□□□□ 0.83
PRAMEF1O95521 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PRAMEF1O95521 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF1O95521 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.23■□□□□ 0.83
PRAMEF1O95521 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF1O95521 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF1O95521 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF1O95521 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF1O95521 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF1O95521 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF1O95521 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF1O95521 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF1O95521 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 SLC29A4P1-201ENST00000398760 971 ntBASIC20.22■□□□□ 0.83
PRAMEF1O95521 BX276092.2-201ENST00000417668 665 ntBASIC20.22■□□□□ 0.83
PRAMEF1O95521 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PRAMEF1O95521 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 AC092720.2-201ENST00000602388 1665 ntBASIC20.22■□□□□ 0.83
PRAMEF1O95521 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF1O95521 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.21■□□□□ 0.83
PRAMEF1O95521 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PRAMEF1O95521 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.21■□□□□ 0.83
PRAMEF1O95521 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PRAMEF1O95521 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRAMEF1O95521 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEF1O95521 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PRAMEF1O95521 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PRAMEF1O95521 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
PRAMEF1O95521 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF1O95521 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
PRAMEF1O95521 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 LINC01006-201ENST00000333319 2292 ntBASIC20.2■□□□□ 0.82
PRAMEF1O95521 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 AC092667.1-201ENST00000434301 2586 ntBASIC20.2■□□□□ 0.82
PRAMEF1O95521 AC020907.5-201ENST00000624372 1936 ntBASIC20.2■□□□□ 0.82
PRAMEF1O95521 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEF1O95521 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.2■□□□□ 0.82
PRAMEF1O95521 LSM12P1-201ENST00000411836 588 ntBASIC20.2■□□□□ 0.82
PRAMEF1O95521 MIPEPP3-201ENST00000412105 444 ntBASIC20.2■□□□□ 0.82
PRAMEF1O95521 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.2■□□□□ 0.82
PRAMEF1O95521 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.2■□□□□ 0.82
PRAMEF1O95521 AL109923.1-201ENST00000618799 583 ntBASIC20.2■□□□□ 0.82
PRAMEF1O95521 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.2■□□□□ 0.82
PRAMEF1O95521 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.2■□□□□ 0.82
PRAMEF1O95521 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF1O95521 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.2■□□□□ 0.82
PRAMEF1O95521 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms