Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.18■□□□□ 0.82
CBX6O95503 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CBX6O95503 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.18■□□□□ 0.82
CBX6O95503 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CBX6O95503 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.18■□□□□ 0.82
CBX6O95503 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.18■□□□□ 0.82
CBX6O95503 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CBX6O95503 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.18■□□□□ 0.82
CBX6O95503 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBX6O95503 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CBX6O95503 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CBX6O95503 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.18■□□□□ 0.82
CBX6O95503 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.18■□□□□ 0.82
CBX6O95503 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.18■□□□□ 0.82
CBX6O95503 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBX6O95503 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBX6O95503 AP004607.7-201ENST00000527152 1677 ntBASIC20.17■□□□□ 0.82
CBX6O95503 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CBX6O95503 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBX6O95503 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBX6O95503 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.17■□□□□ 0.82
CBX6O95503 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CBX6O95503 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CBX6O95503 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CBX6O95503 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CBX6O95503 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CBX6O95503 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CBX6O95503 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CBX6O95503 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.17■□□□□ 0.82
CBX6O95503 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBX6O95503 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CBX6O95503 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.16■□□□□ 0.82
CBX6O95503 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 AC004408.2-201ENST00000623613 2777 ntBASIC20.16■□□□□ 0.82
CBX6O95503 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.16■□□□□ 0.82
CBX6O95503 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.16■□□□□ 0.82
CBX6O95503 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 AC068587.7-201ENST00000641602 218 ntBASIC20.16■□□□□ 0.82
CBX6O95503 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.16■□□□□ 0.82
CBX6O95503 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX6O95503 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.16■□□□□ 0.82
CBX6O95503 TCF3P1-201ENST00000423021 1937 ntBASIC20.15■□□□□ 0.82
CBX6O95503 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CBX6O95503 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.15■□□□□ 0.82
CBX6O95503 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CBX6O95503 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CBX6O95503 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.15■□□□□ 0.82
CBX6O95503 AL158211.5-201ENST00000623583 2518 ntBASIC20.15■□□□□ 0.82
CBX6O95503 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.15■□□□□ 0.82
CBX6O95503 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX6O95503 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CBX6O95503 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CBX6O95503 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.14■□□□□ 0.82
CBX6O95503 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.14■□□□□ 0.82
CBX6O95503 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CBX6O95503 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CBX6O95503 AC125437.2-201ENST00000625180 2167 ntBASIC20.14■□□□□ 0.81
CBX6O95503 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.14■□□□□ 0.81
CBX6O95503 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CBX6O95503 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.14■□□□□ 0.81
CBX6O95503 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CBX6O95503 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.14■□□□□ 0.81
CBX6O95503 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX6O95503 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX6O95503 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CBX6O95503 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CBX6O95503 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX6O95503 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.14■□□□□ 0.81
CBX6O95503 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX6O95503 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CBX6O95503 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CBX6O95503 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CBX6O95503 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CBX6O95503 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.14■□□□□ 0.81
CBX6O95503 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.14■□□□□ 0.81
CBX6O95503 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX6O95503 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
CBX6O95503 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms