Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
SIX6O95475 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX6O95475 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX6O95475 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIX6O95475 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17■□□□□ 0.31
SIX6O95475 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17■□□□□ 0.31
SIX6O95475 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
SIX6O95475 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIX6O95475 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17■□□□□ 0.31
SIX6O95475 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17■□□□□ 0.31
SIX6O95475 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17■□□□□ 0.31
SIX6O95475 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX6O95475 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX6O95475 AP006587.3-201ENST00000525742 1516 ntBASIC17■□□□□ 0.31
SIX6O95475 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SIX6O95475 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17■□□□□ 0.31
SIX6O95475 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIX6O95475 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.99■□□□□ 0.31
SIX6O95475 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.99■□□□□ 0.31
SIX6O95475 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX6O95475 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SIX6O95475 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SIX6O95475 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX6O95475 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.99■□□□□ 0.31
SIX6O95475 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIX6O95475 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX6O95475 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX6O95475 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIX6O95475 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX6O95475 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.99■□□□□ 0.31
SIX6O95475 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIX6O95475 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
SIX6O95475 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SIX6O95475 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.99■□□□□ 0.31
SIX6O95475 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.99■□□□□ 0.31
SIX6O95475 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.99■□□□□ 0.31
SIX6O95475 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SIX6O95475 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.98■□□□□ 0.31
SIX6O95475 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SIX6O95475 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX6O95475 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX6O95475 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.98■□□□□ 0.31
SIX6O95475 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.98■□□□□ 0.31
SIX6O95475 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX6O95475 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX6O95475 AIRN-201ENST00000601203 4374 ntBASIC16.98■□□□□ 0.31
SIX6O95475 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SIX6O95475 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SIX6O95475 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SIX6O95475 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.97■□□□□ 0.31
SIX6O95475 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SIX6O95475 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SIX6O95475 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SIX6O95475 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SIX6O95475 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SIX6O95475 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX6O95475 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SIX6O95475 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.96■□□□□ 0.31
SIX6O95475 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.96■□□□□ 0.31
SIX6O95475 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX6O95475 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SIX6O95475 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.96■□□□□ 0.31
SIX6O95475 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SIX6O95475 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.96■□□□□ 0.31
SIX6O95475 pRNA.6-201ENST00000610482 90 ntBASIC16.96■□□□□ 0.31
SIX6O95475 pRNA.5-201ENST00000612139 90 ntBASIC16.96■□□□□ 0.31
SIX6O95475 pRNA.11-201ENST00000618423 90 ntBASIC16.96■□□□□ 0.31
SIX6O95475 pRNA.13-201ENST00000619112 90 ntBASIC16.96■□□□□ 0.31
SIX6O95475 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SIX6O95475 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX6O95475 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX6O95475 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SIX6O95475 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX6O95475 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIX6O95475 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIX6O95475 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.96■□□□□ 0.3
SIX6O95475 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SIX6O95475 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
SIX6O95475 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
SIX6O95475 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SIX6O95475 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIX6O95475 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX6O95475 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.95■□□□□ 0.3
SIX6O95475 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.95■□□□□ 0.3
SIX6O95475 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.95■□□□□ 0.3
SIX6O95475 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX6O95475 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.95■□□□□ 0.3
SIX6O95475 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX6O95475 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms