Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.17■□□□□ 0.02
SH2D1AO60880 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SH2D1AO60880 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SH2D1AO60880 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SH2D1AO60880 AC125437.2-201ENST00000625180 2167 ntBASIC15.17■□□□□ 0.02
SH2D1AO60880 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.16■□□□□ 0.02
SH2D1AO60880 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.16■□□□□ 0.02
SH2D1AO60880 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
SH2D1AO60880 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.16■□□□□ 0.02
SH2D1AO60880 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.16■□□□□ 0.02
SH2D1AO60880 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.16■□□□□ 0.02
SH2D1AO60880 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.16■□□□□ 0.02
SH2D1AO60880 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.16■□□□□ 0.02
SH2D1AO60880 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SH2D1AO60880 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SH2D1AO60880 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SH2D1AO60880 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH2D1AO60880 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.15■□□□□ 0.02
SH2D1AO60880 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.15■□□□□ 0.02
SH2D1AO60880 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SH2D1AO60880 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SH2D1AO60880 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.15■□□□□ 0.02
SH2D1AO60880 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.15■□□□□ 0.02
SH2D1AO60880 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SH2D1AO60880 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.15■□□□□ 0.02
SH2D1AO60880 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.15■□□□□ 0.02
SH2D1AO60880 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SH2D1AO60880 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.15■□□□□ 0.02
SH2D1AO60880 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.15■□□□□ 0.02
SH2D1AO60880 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.15■□□□□ 0.02
SH2D1AO60880 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SH2D1AO60880 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.15■□□□□ 0.02
SH2D1AO60880 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH2D1AO60880 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SH2D1AO60880 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SH2D1AO60880 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.14■□□□□ 0.01
SH2D1AO60880 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 AC098818.2-201ENST00000564925 2320 ntBASIC15.14■□□□□ 0.01
SH2D1AO60880 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.14■□□□□ 0.01
SH2D1AO60880 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.14■□□□□ 0.01
SH2D1AO60880 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SH2D1AO60880 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.14■□□□□ 0.01
SH2D1AO60880 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.14■□□□□ 0.01
SH2D1AO60880 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.14■□□□□ 0.01
SH2D1AO60880 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.14■□□□□ 0.01
SH2D1AO60880 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D1AO60880 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D1AO60880 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SH2D1AO60880 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D1AO60880 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms