Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK2O43353 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK2O43353 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RIPK2O43353 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK2O43353 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK2O43353 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RIPK2O43353 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK2O43353 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
RIPK2O43353 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK2O43353 MIR572-201ENST00000384983 95 ntBASIC20.62■□□□□ 0.89
RIPK2O43353 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RIPK2O43353 AC245052.3-201ENST00000450182 901 ntBASIC20.62■□□□□ 0.89
RIPK2O43353 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.62■□□□□ 0.89
RIPK2O43353 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.62■□□□□ 0.89
RIPK2O43353 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
RIPK2O43353 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK2O43353 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.62■□□□□ 0.89
RIPK2O43353 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.62■□□□□ 0.89
RIPK2O43353 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK2O43353 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RIPK2O43353 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RIPK2O43353 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.62■□□□□ 0.89
RIPK2O43353 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPK2O43353 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RIPK2O43353 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.62■□□□□ 0.89
RIPK2O43353 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.61■□□□□ 0.89
RIPK2O43353 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK2O43353 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK2O43353 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK2O43353 AC135279.3-201ENST00000610945 1311 ntBASIC20.61■□□□□ 0.89
RIPK2O43353 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RIPK2O43353 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK2O43353 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.61■□□□□ 0.89
RIPK2O43353 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.61■□□□□ 0.89
RIPK2O43353 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.61■□□□□ 0.89
RIPK2O43353 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK2O43353 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.61■□□□□ 0.89
RIPK2O43353 AC116050.2-201ENST00000612102 1779 ntBASIC20.61■□□□□ 0.89
RIPK2O43353 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RIPK2O43353 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK2O43353 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.61■□□□□ 0.89
RIPK2O43353 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK2O43353 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK2O43353 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPK2O43353 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.61■□□□□ 0.89
RIPK2O43353 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
RIPK2O43353 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.6■□□□□ 0.89
RIPK2O43353 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.6■□□□□ 0.89
RIPK2O43353 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.6■□□□□ 0.89
RIPK2O43353 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.6■□□□□ 0.89
RIPK2O43353 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RIPK2O43353 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.6■□□□□ 0.89
RIPK2O43353 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.6■□□□□ 0.89
RIPK2O43353 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RIPK2O43353 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIPK2O43353 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.6■□□□□ 0.89
RIPK2O43353 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.6■□□□□ 0.89
RIPK2O43353 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIPK2O43353 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.59■□□□□ 0.89
RIPK2O43353 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIPK2O43353 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIPK2O43353 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIPK2O43353 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIPK2O43353 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIPK2O43353 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIPK2O43353 AC027682.1-201ENST00000562846 899 ntBASIC20.59■□□□□ 0.89
RIPK2O43353 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIPK2O43353 KRT16P2-201ENST00000414673 1423 ntBASIC20.59■□□□□ 0.89
RIPK2O43353 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RIPK2O43353 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.59■□□□□ 0.89
RIPK2O43353 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.59■□□□□ 0.89
RIPK2O43353 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RIPK2O43353 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.58■□□□□ 0.89
RIPK2O43353 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.58■□□□□ 0.89
RIPK2O43353 DPP3P2-201ENST00000416030 1696 ntBASIC20.58■□□□□ 0.89
RIPK2O43353 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RIPK2O43353 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIPK2O43353 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIPK2O43353 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.58■□□□□ 0.89
RIPK2O43353 AC093484.2-201ENST00000580996 2166 ntBASIC20.58■□□□□ 0.89
RIPK2O43353 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RIPK2O43353 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIPK2O43353 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIPK2O43353 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIPK2O43353 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIPK2O43353 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIPK2O43353 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RIPK2O43353 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms