Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TRAFD1O14545 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRAFD1O14545 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAFD1O14545 ID1-201ENST00000376105 1233 ntBASIC20.8■□□□□ 0.92
TRAFD1O14545 GPX1P1-201ENST00000388829 606 ntBASIC20.8■□□□□ 0.92
TRAFD1O14545 AL512625.2-201ENST00000417533 625 ntBASIC20.8■□□□□ 0.92
TRAFD1O14545 GUSBP6-202ENST00000438529 1198 ntBASIC20.8■□□□□ 0.92
TRAFD1O14545 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAFD1O14545 AF201337.1-201ENST00000520239 748 ntBASIC20.8■□□□□ 0.92
TRAFD1O14545 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.8■□□□□ 0.92
TRAFD1O14545 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRAFD1O14545 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAFD1O14545 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRAFD1O14545 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAFD1O14545 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAFD1O14545 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
TRAFD1O14545 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRAFD1O14545 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAFD1O14545 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAFD1O14545 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAFD1O14545 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRAFD1O14545 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
TRAFD1O14545 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAFD1O14545 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TRAFD1O14545 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAFD1O14545 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAFD1O14545 AC093787.1-201ENST00000450396 207 ntBASIC20.79■□□□□ 0.92
TRAFD1O14545 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAFD1O14545 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAFD1O14545 AC008694.1-202ENST00000636953 945 ntBASIC20.79■□□□□ 0.92
TRAFD1O14545 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRAFD1O14545 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAFD1O14545 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRAFD1O14545 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAFD1O14545 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAFD1O14545 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAFD1O14545 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRAFD1O14545 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAFD1O14545 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
TRAFD1O14545 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TRAFD1O14545 AC011484.1-201ENST00000377652 1995 ntBASIC20.78■□□□□ 0.92
TRAFD1O14545 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAFD1O14545 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRAFD1O14545 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAFD1O14545 HLA-L-209ENST00000420110 1011 ntBASIC20.78■□□□□ 0.92
TRAFD1O14545 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAFD1O14545 TSPY6P-201ENST00000448518 926 ntBASIC20.78■□□□□ 0.92
TRAFD1O14545 AC105036.2-201ENST00000569468 176 ntBASIC20.78■□□□□ 0.92
TRAFD1O14545 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAFD1O14545 AC104771.1-201ENST00000603335 964 ntBASIC20.78■□□□□ 0.92
TRAFD1O14545 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAFD1O14545 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAFD1O14545 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAFD1O14545 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAFD1O14545 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAFD1O14545 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAFD1O14545 AP005212.1-201ENST00000581547 1997 ntBASIC20.77■□□□□ 0.92
TRAFD1O14545 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAFD1O14545 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAFD1O14545 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
TRAFD1O14545 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRAFD1O14545 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAFD1O14545 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.77■□□□□ 0.92
TRAFD1O14545 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAFD1O14545 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAFD1O14545 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.77■□□□□ 0.92
TRAFD1O14545 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAFD1O14545 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAFD1O14545 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAFD1O14545 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAFD1O14545 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAFD1O14545 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAFD1O14545 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
TRAFD1O14545 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAFD1O14545 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAFD1O14545 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAFD1O14545 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRAFD1O14545 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAFD1O14545 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAFD1O14545 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAFD1O14545 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAFD1O14545 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRAFD1O14545 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAFD1O14545 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAFD1O14545 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRAFD1O14545 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAFD1O14545 AL109923.1-201ENST00000618799 583 ntBASIC20.76■□□□□ 0.91
TRAFD1O14545 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAFD1O14545 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
TRAFD1O14545 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRAFD1O14545 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAFD1O14545 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAFD1O14545 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TRAFD1O14545 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAFD1O14545 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAFD1O14545 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAFD1O14545 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAFD1O14545 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRAFD1O14545 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.75■□□□□ 0.91
TRAFD1O14545 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms