Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
O00370 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
O00370 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
O00370 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
O00370 GUSBP6-202ENST00000438529 1198 ntBASIC21.67■■□□□ 1.06
O00370 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.67■■□□□ 1.06
O00370 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.67■■□□□ 1.06
O00370 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.67■■□□□ 1.06
O00370 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
O00370 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.67■■□□□ 1.06
O00370 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
O00370 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.66■■□□□ 1.06
O00370 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
O00370 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.66■■□□□ 1.06
O00370 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
O00370 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
O00370 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
O00370 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.66■■□□□ 1.06
O00370 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
O00370 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
O00370 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
O00370 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
O00370 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
O00370 AL355472.2-201ENST00000422958 438 ntBASIC21.66■■□□□ 1.06
O00370 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.66■■□□□ 1.06
O00370 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.66■■□□□ 1.06
O00370 CYP2T3P-201ENST00000601990 817 ntBASIC21.66■■□□□ 1.06
O00370 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
O00370 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
O00370 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
O00370 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.66■■□□□ 1.06
O00370 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
O00370 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
O00370 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
O00370 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
O00370 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.65■■□□□ 1.06
O00370 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.65■■□□□ 1.06
O00370 AP005212.1-201ENST00000581547 1997 ntBASIC21.65■■□□□ 1.06
O00370 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
O00370 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
O00370 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
O00370 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
O00370 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.65■■□□□ 1.06
O00370 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.65■■□□□ 1.06
O00370 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
O00370 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
O00370 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.65■■□□□ 1.06
O00370 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.65■■□□□ 1.06
O00370 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.65■■□□□ 1.06
O00370 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
O00370 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
O00370 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
O00370 MKRN4P-201ENST00000444706 1521 ntBASIC21.65■■□□□ 1.06
O00370 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
O00370 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.64■■□□□ 1.06
O00370 KRT8P36-201ENST00000489121 1440 ntBASIC21.64■■□□□ 1.06
O00370 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
O00370 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
O00370 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
O00370 GPX1P1-201ENST00000388829 606 ntBASIC21.64■■□□□ 1.05
O00370 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.64■■□□□ 1.05
O00370 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
O00370 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
O00370 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
O00370 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
O00370 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
O00370 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
O00370 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
O00370 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.64■■□□□ 1.05
O00370 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.64■■□□□ 1.05
O00370 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
O00370 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.64■■□□□ 1.05
O00370 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
O00370 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.64■■□□□ 1.05
O00370 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
O00370 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
O00370 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
O00370 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.63■■□□□ 1.05
O00370 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
O00370 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
O00370 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
O00370 TSPY6P-201ENST00000448518 926 ntBASIC21.63■■□□□ 1.05
O00370 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.63■■□□□ 1.05
O00370 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.63■■□□□ 1.05
O00370 AL356652.1-201ENST00000615962 565 ntBASIC21.63■■□□□ 1.05
O00370 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.63■■□□□ 1.05
O00370 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.63■■□□□ 1.05
O00370 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.63■■□□□ 1.05
O00370 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
O00370 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
O00370 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
O00370 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
O00370 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
O00370 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
O00370 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
O00370 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
O00370 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
O00370 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
O00370 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
O00370 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms