Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.84■□□□□ 0.77
TAF4O00268 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.84■□□□□ 0.77
TAF4O00268 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.84■□□□□ 0.77
TAF4O00268 AC120498.10-201ENST00000621827 505 ntBASIC19.84■□□□□ 0.77
TAF4O00268 AL049637.2-201ENST00000641778 930 ntBASIC19.84■□□□□ 0.77
TAF4O00268 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TAF4O00268 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.84■□□□□ 0.77
TAF4O00268 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.84■□□□□ 0.77
TAF4O00268 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.83■□□□□ 0.77
TAF4O00268 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.83■□□□□ 0.77
TAF4O00268 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.83■□□□□ 0.77
TAF4O00268 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.83■□□□□ 0.77
TAF4O00268 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.83■□□□□ 0.77
TAF4O00268 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TAF4O00268 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.83■□□□□ 0.77
TAF4O00268 PRKY-204ENST00000533551 1019 ntBASIC19.83■□□□□ 0.77
TAF4O00268 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.83■□□□□ 0.77
TAF4O00268 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TAF4O00268 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TAF4O00268 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.83■□□□□ 0.76
TAF4O00268 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TAF4O00268 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TAF4O00268 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TAF4O00268 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TAF4O00268 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TAF4O00268 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TAF4O00268 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.83■□□□□ 0.76
TAF4O00268 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.83■□□□□ 0.76
TAF4O00268 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.82■□□□□ 0.76
TAF4O00268 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TAF4O00268 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.82■□□□□ 0.76
TAF4O00268 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TAF4O00268 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TAF4O00268 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TAF4O00268 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TAF4O00268 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TAF4O00268 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.82■□□□□ 0.76
TAF4O00268 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.82■□□□□ 0.76
TAF4O00268 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.82■□□□□ 0.76
TAF4O00268 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
TAF4O00268 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.81■□□□□ 0.76
TAF4O00268 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TAF4O00268 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.81■□□□□ 0.76
TAF4O00268 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.81■□□□□ 0.76
TAF4O00268 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.81■□□□□ 0.76
TAF4O00268 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.81■□□□□ 0.76
TAF4O00268 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.81■□□□□ 0.76
TAF4O00268 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.81■□□□□ 0.76
TAF4O00268 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.81■□□□□ 0.76
TAF4O00268 AL590326.2-201ENST00000625139 305 ntBASIC19.81■□□□□ 0.76
TAF4O00268 AC092368.3-202ENST00000574180 1591 ntBASIC19.81■□□□□ 0.76
TAF4O00268 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TAF4O00268 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
TAF4O00268 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TAF4O00268 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TAF4O00268 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TAF4O00268 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TAF4O00268 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TAF4O00268 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TAF4O00268 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TAF4O00268 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TAF4O00268 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TAF4O00268 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.8■□□□□ 0.76
TAF4O00268 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TAF4O00268 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TAF4O00268 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.8■□□□□ 0.76
TAF4O00268 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.8■□□□□ 0.76
TAF4O00268 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
TAF4O00268 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.8■□□□□ 0.76
TAF4O00268 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.8■□□□□ 0.76
TAF4O00268 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.8■□□□□ 0.76
TAF4O00268 AL355075.4-201ENST00000554988 638 ntBASIC19.8■□□□□ 0.76
TAF4O00268 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TAF4O00268 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.8■□□□□ 0.76
TAF4O00268 MIR4785-201ENST00000585005 73 ntBASIC19.8■□□□□ 0.76
TAF4O00268 AC008175.2-201ENST00000612840 297 ntBASIC19.8■□□□□ 0.76
TAF4O00268 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms