Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC01548A6NM66 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LINC01548A6NM66 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LINC01548A6NM66 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LINC01548A6NM66 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.05■□□□□ 0.16
LINC01548A6NM66 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.05■□□□□ 0.16
LINC01548A6NM66 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC01548A6NM66 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01548A6NM66 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01548A6NM66 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01548A6NM66 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01548A6NM66 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01548A6NM66 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01548A6NM66 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 PGM5P4-201ENST00000421970 445 ntBASIC16.04■□□□□ 0.16
LINC01548A6NM66 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01548A6NM66 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01548A6NM66 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LINC01548A6NM66 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01548A6NM66 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC01548A6NM66 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.03■□□□□ 0.16
LINC01548A6NM66 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.03■□□□□ 0.16
LINC01548A6NM66 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.03■□□□□ 0.16
LINC01548A6NM66 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.03■□□□□ 0.16
LINC01548A6NM66 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.03■□□□□ 0.16
LINC01548A6NM66 KRT18P6-201ENST00000555540 1265 ntBASIC16.03■□□□□ 0.16
LINC01548A6NM66 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.03■□□□□ 0.16
LINC01548A6NM66 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.03■□□□□ 0.16
LINC01548A6NM66 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LINC01548A6NM66 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LINC01548A6NM66 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
LINC01548A6NM66 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC01548A6NM66 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01548A6NM66 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01548A6NM66 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01548A6NM66 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01548A6NM66 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01548A6NM66 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.02■□□□□ 0.16
LINC01548A6NM66 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01548A6NM66 C2orf69P4-201ENST00000565394 541 ntBASIC16.02■□□□□ 0.16
LINC01548A6NM66 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.02■□□□□ 0.16
LINC01548A6NM66 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LINC01548A6NM66 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC01548A6NM66 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01548A6NM66 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01548A6NM66 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01548A6NM66 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01548A6NM66 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01548A6NM66 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC01548A6NM66 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
LINC01548A6NM66 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.01■□□□□ 0.15
LINC01548A6NM66 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LINC01548A6NM66 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01548A6NM66 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01548A6NM66 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LINC01548A6NM66 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01548A6NM66 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01548A6NM66 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01548A6NM66 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01548A6NM66 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LINC01548A6NM66 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01548A6NM66 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01548A6NM66 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.01■□□□□ 0.15
LINC01548A6NM66 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01548A6NM66 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms