Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.71■■□□□ 1.23
SPDYE4A6NLX3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.71■■□□□ 1.23
SPDYE4A6NLX3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SPDYE4A6NLX3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SPDYE4A6NLX3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SPDYE4A6NLX3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SPDYE4A6NLX3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
SPDYE4A6NLX3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SPDYE4A6NLX3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.71■■□□□ 1.23
SPDYE4A6NLX3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SPDYE4A6NLX3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 AF201337.1-201ENST00000520239 748 ntBASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 AL138781.1-201ENST00000566567 1274 ntBASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SPDYE4A6NLX3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 AC105036.2-201ENST00000569468 176 ntBASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.69■■□□□ 1.22
SPDYE4A6NLX3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 FAM201B-201ENST00000458407 597 ntBASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 SLC7A5P2-201ENST00000553010 536 ntBASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 AP004607.7-201ENST00000527152 1677 ntBASIC22.68■■□□□ 1.22
SPDYE4A6NLX3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 LINC01960-201ENST00000563759 1884 ntBASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPDYE4A6NLX3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 AIRN-201ENST00000601203 4374 ntBASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms