Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.02■□□□□ 0.15
PCP4L1A6NKN8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCP4L1A6NKN8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCP4L1A6NKN8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCP4L1A6NKN8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCP4L1A6NKN8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCP4L1A6NKN8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.01■□□□□ 0.15
PCP4L1A6NKN8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16■□□□□ 0.15
PCP4L1A6NKN8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCP4L1A6NKN8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCP4L1A6NKN8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 AC079598.2-202ENST00000546624 1451 ntBASIC16■□□□□ 0.15
PCP4L1A6NKN8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCP4L1A6NKN8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16■□□□□ 0.15
PCP4L1A6NKN8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
PCP4L1A6NKN8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16■□□□□ 0.15
PCP4L1A6NKN8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16■□□□□ 0.15
PCP4L1A6NKN8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCP4L1A6NKN8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 MIR6089-201ENST00000616698 64 ntBASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.99■□□□□ 0.15
PCP4L1A6NKN8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms