Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF222A6NCQ9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF222A6NCQ9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF222A6NCQ9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF222A6NCQ9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RNF222A6NCQ9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF222A6NCQ9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF222A6NCQ9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF222A6NCQ9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF222A6NCQ9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF222A6NCQ9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF222A6NCQ9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF222A6NCQ9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF222A6NCQ9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF222A6NCQ9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RNF222A6NCQ9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF222A6NCQ9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF222A6NCQ9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.52■□□□□ 0.23
RNF222A6NCQ9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
RNF222A6NCQ9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF222A6NCQ9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.52■□□□□ 0.23
RNF222A6NCQ9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF222A6NCQ9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF222A6NCQ9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
RNF222A6NCQ9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF222A6NCQ9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RNF222A6NCQ9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 MIR4508-201ENST00000584178 70 ntBASIC16.5■□□□□ 0.23
RNF222A6NCQ9 AC010980.1-201ENST00000587192 1142 ntBASIC16.5■□□□□ 0.23
RNF222A6NCQ9 pRNA.6-201ENST00000610482 90 ntBASIC16.5■□□□□ 0.23
RNF222A6NCQ9 pRNA.5-201ENST00000612139 90 ntBASIC16.5■□□□□ 0.23
RNF222A6NCQ9 pRNA.11-201ENST00000618423 90 ntBASIC16.5■□□□□ 0.23
RNF222A6NCQ9 pRNA.13-201ENST00000619112 90 ntBASIC16.5■□□□□ 0.23
RNF222A6NCQ9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF222A6NCQ9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 AC241377.3-202ENST00000626088 1088 ntBASIC16.49■□□□□ 0.23
RNF222A6NCQ9 AC241585.3-202ENST00000628937 1088 ntBASIC16.49■□□□□ 0.23
RNF222A6NCQ9 AC245100.8-202ENST00000629247 1058 ntBASIC16.49■□□□□ 0.23
RNF222A6NCQ9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF222A6NCQ9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms