Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
HFM1A2PYH4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC30.23■■■□□ 2.43
HFM1A2PYH4 AC006058.3-201ENST00000606217 1069 ntBASIC30.23■■■□□ 2.43
HFM1A2PYH4 AC069544.1-201ENST00000609399 999 ntBASIC30.23■■■□□ 2.43
HFM1A2PYH4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC30.23■■■□□ 2.43
HFM1A2PYH4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC30.23■■■□□ 2.43
HFM1A2PYH4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
HFM1A2PYH4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC30.23■■■□□ 2.43
HFM1A2PYH4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
HFM1A2PYH4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
HFM1A2PYH4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
HFM1A2PYH4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
HFM1A2PYH4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC30.23■■■□□ 2.43
HFM1A2PYH4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
HFM1A2PYH4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
HFM1A2PYH4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC30.23■■■□□ 2.43
HFM1A2PYH4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
HFM1A2PYH4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
HFM1A2PYH4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
HFM1A2PYH4 AC023632.3-201ENST00000521633 145 ntBASIC30.22■■■□□ 2.43
HFM1A2PYH4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 AC233263.1-201ENST00000578059 224 ntBASIC30.22■■■□□ 2.43
HFM1A2PYH4 AC008687.6-201ENST00000596318 630 ntBASIC30.22■■■□□ 2.43
HFM1A2PYH4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 AC073648.6-201ENST00000641589 218 ntBASIC30.22■■■□□ 2.43
HFM1A2PYH4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
HFM1A2PYH4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
HFM1A2PYH4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
HFM1A2PYH4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
HFM1A2PYH4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
HFM1A2PYH4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
HFM1A2PYH4 AC093827.2-201ENST00000512654 315 ntBASIC30.22■■■□□ 2.43
HFM1A2PYH4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC30.22■■■□□ 2.43
HFM1A2PYH4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC30.21■■■□□ 2.43
HFM1A2PYH4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
HFM1A2PYH4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC30.21■■■□□ 2.43
HFM1A2PYH4 FP700111.2-201ENST00000619190 1892 ntBASIC30.21■■■□□ 2.43
HFM1A2PYH4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
HFM1A2PYH4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
HFM1A2PYH4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
HFM1A2PYH4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
HFM1A2PYH4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC30.2■■■□□ 2.43
HFM1A2PYH4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
HFM1A2PYH4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC30.2■■■□□ 2.43
HFM1A2PYH4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
HFM1A2PYH4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
HFM1A2PYH4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
HFM1A2PYH4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC30.2■■■□□ 2.43
HFM1A2PYH4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
HFM1A2PYH4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC30.2■■■□□ 2.42
HFM1A2PYH4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC30.2■■■□□ 2.42
HFM1A2PYH4 AC128676.1-201ENST00000454392 318 ntBASIC30.2■■■□□ 2.42
HFM1A2PYH4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
HFM1A2PYH4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC30.2■■■□□ 2.42
HFM1A2PYH4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC30.2■■■□□ 2.42
HFM1A2PYH4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 DET1-205ENST00000558413 583 ntTSL 4 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
HFM1A2PYH4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC30.19■■■□□ 2.42
HFM1A2PYH4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
HFM1A2PYH4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
HFM1A2PYH4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
HFM1A2PYH4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC30.18■■■□□ 2.42
HFM1A2PYH4 HES2-206ENST00000489730 730 ntTSL 2 BASIC30.18■■■□□ 2.42
HFM1A2PYH4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
HFM1A2PYH4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
HFM1A2PYH4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
HFM1A2PYH4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
HFM1A2PYH4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
HFM1A2PYH4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC30.17■■■□□ 2.42
HFM1A2PYH4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
HFM1A2PYH4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
HFM1A2PYH4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
HFM1A2PYH4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms