Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC196A0A1B0GTZ2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CCDC196A0A1B0GTZ2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC196A0A1B0GTZ2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC196A0A1B0GTZ2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.64■■□□□ 1.38
CCDC196A0A1B0GTZ2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC196A0A1B0GTZ2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CCDC196A0A1B0GTZ2 AL355472.2-201ENST00000422958 438 ntBASIC23.64■■□□□ 1.37
CCDC196A0A1B0GTZ2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.64■■□□□ 1.37
CCDC196A0A1B0GTZ2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC196A0A1B0GTZ2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC196A0A1B0GTZ2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.64■■□□□ 1.37
CCDC196A0A1B0GTZ2 AL157384.1-201ENST00000445995 2473 ntBASIC23.64■■□□□ 1.37
CCDC196A0A1B0GTZ2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC196A0A1B0GTZ2 LINC01521-201ENST00000504184 1943 ntBASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 GPX1P1-201ENST00000388829 606 ntBASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC196A0A1B0GTZ2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 AC090192.1-201ENST00000517740 490 ntBASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 LINC01006-201ENST00000333319 2292 ntBASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC196A0A1B0GTZ2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 LSM12P1-201ENST00000411836 588 ntBASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CCDC196A0A1B0GTZ2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC196A0A1B0GTZ2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms